SNPJam Report for mmp20

Showing coding SNPs for MMP20 (Gene ID: 9313)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 2245803 Link_out

Alleles: A/C

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
11 102495998

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004771 Link_out NP_004762 Link_out 2 K [Lys] / M [Met]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TTTTCTCCTTTTGCCACTTGGTAAATAACAAAAAAAATATGAAGCTTTCCCTGATTCCTGTGTACAGTTGTGTTACCCCATCATCAG
GGAGAGAAATGAGCTGTATAATTACTGTTTGAGACATGAATCATCCTTGCTCGGAGGGTCCAGACCTGTTTGACTCTATAAAAGGAGCTC
AAGGTCGAAGTGCAAACGTGCACTGTCTGCCATCCCCCAGGCTGATATAATTACCAAGCTACTGTGAGGGGATGAAGGTGCTCCCTGCAT
CTGGCCTTGCTGTCTTCCTCATCATGGCTTTGA A/C GTTTTCCACTGCAGCCCCCTCCCTAGTTGCAGCCTCCCCCAGGACCTGGAGG
AACAACTACCGCCTCGCACAGGTTTGTGAATTTTTGCCCAATTCCTTCTTGCTCCTCTGCCCTAGAAAACCTAAAAGGGCATAGTGAGAA
AATAAGAAAAAAATTCTATTGTTCTTTTAAAATCATTTTATATAAGTCCATTGAAGTCTAACTGATGCTATCTTCTGTCCACCTAGATTG
GTGTCTGGTGCATATTAGGTGTACCATGTTACATGACTGAATAAATACATGAGGATATATCTACCTAG-3'

[Top]

RS ID: 1784424 Link_out

Alleles: A/C

Validation:

  • By cluster
  • By frequency
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
11 102477377

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004771 Link_out NP_004762 Link_out 2 T [Thr] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCACAACAGCCTTCTGAGGTGAGTACTATTATTATCCCTCCCTTTTAACAAGTGAGGAAGCTGAGGCTTGCAAAGTTGAATAATGTG
CCTCAAATCACACAGCTCAGCAACCAGGAGAGCCGGGACTCAAACCCATACCTGCCCTCAACAGCCATGATCATGATCACATGTCCAGCG
TGAAAGTGTACAACCTCCCCTGGGGCTCTAGAGCAGAAGTGTGTGAACTCCAAATTCCCGTTACCATTTTGACCAACTCATTTTGAATCC
TAGGACCTCGGAAAGTATTCCTGGGGAAGCCCA A/C TCTGCCCCATGCCCCCCATCACAAGCCATCCATCCCTGACCTCTGTGACTCC
AGCTCATCCTTTGACGCTGTGACAATGCTGGGGAAGGAGCTCCTGCTCTTCAAGGACCGGTAAGCCTCAGACACGCCACCGACTCTCATT
GGGCCTCATCTCCACTCCCAGACAAACGTCGTCCCACAGGTCCTTGTTGCTGCCTTGTATGAAGATCATGCAGAAATGCTGTCCTATGCA
GCAGAAGGGTGGTAGGCAGGGGTCTTTGGGGGAGATAGAGAACTGCCAAAACTACTGTTTGTGGTGCA-3'

[Top]

RS ID: 1784423 Link_out

Alleles: C/T

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
11 102477395

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004771 Link_out NP_004762 Link_out 2 V [Val] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ACAGGAATTATTTAATTCTCACAACAGCCTTCTGAGGTGAGTACTATTATTATCCCTCCCTTTTAACAAGTGAGGAAGCTGAGGCTT
GCAAAGTTGAATAATGTGCCTCAAATCACACAGCTCAGCAACCAGGAGAGCCGGGACTCAAACCCATACCTGCCCTCAACAGCCATGATC
ATGATCACATGTCCAGCGTGAAAGTGTACAACCTCCCCTGGGGCTCTAGAGCAGAAGTGTGTGAACTCCAAATTCCCGTTACCATTTTGA
CCAACTCATTTTGAATCCTAGGACCTCGGAAAG C/T ATTCCTGGGGAAGCCCACTCTGCCCCATGCCCCCCATCACAAGCCATCCATC
CCTGACCTCTGTGACTCCAGCTCATCCTTTGACGCTGTGACAATGCTGGGGAAGGAGCTCCTGCTCTTCAAGGACCGGTAAGCCTCAGAC
ACGCCACCGACTCTCATTGGGCCTCATCTCCACTCCCAGACAAACGTCGTCCCACAGGTCCTTGTTGCTGCCTTGTATGAAGATCATGCA
GAAATGCTGTCCTATGCAGCAGAAGGGTGGTAGGCAGGGGTCTTTGGGGGAGATAGAGAACTGCCAAA-3'