SNPJam Report for VCP

Showing coding SNPs for VCP (Gene ID: 7415)

Show all SNPs for this gene at dbSNP

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This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 77248841 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
9 35060435

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_007126 Link_out NP_009057 Link_out 1 K [Lys] / E [Glu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCTCTTAAAGAAAAACAGCCTCTATTCCTTGCCCTCAGGCAAATCAATACATAGTTCAGCCTATTGTAGCTCACCTTGTCAAAGAT
TTCTCTGACATTGGCCTCAGACTCCCCAAACCACATGGTGAGCAGCTCAGGACCCTTGATGGAGATGAAGTTGGCCTGGCATTCATTAGC
AATGGCTTTGGCCAACAAAGTTT C/T CCCACAGCCAGGAGGTCCATAGAACAGAACTCCCTTGGAAGGTGTCATGCCAAACTTCAGGA
ATTTGTCTGGGTGCTCCACAGGATACTAGGAGGAAAAGGAAAGAGGGTTCAAGGCTACCTCCACATTTTGAAAGAAACCTAACTAAACAG
AAGCATCCCCTCCATTATTTCATGGTGTACCCAATGGTATCAGATCCA-3'

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RS ID: 77203288 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
9 35059655

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_007126 Link_out NP_009057 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGTGGGATGTAGATGAGCTGATCAAGACGGCCAGGTCTGAGGATGGCAGGATCAATGATGTCAGGCCGGTTGGTAGCGCCAATGATG
AACACATTTTTTTT G/T GTGGACATGCCATCCATTTCTGTCAGGATCTGGTTGATGACTCGGTCAGCAGCCCCACCACCATCTCCAAT
GTTACCTCCACGAGCCTTGGCAATCGAATC-3'

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RS ID: 71818331 Link_out

Alleles: (LARGEDELETION)/-

Validation:

Not Completed

Details:

Chromosome Reference Position
9 35059801

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_007126 Link_out NP_009057 Link_out 2 Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGTGGAATCTTGTCCAGAAACTAAAGAGCACTCCGTACCAGCCTGAGGACTCATGCAAGTCTCCCACAGCCCATGATCTTGCACCT
GCCTTGGCAACTGGGGACTTGCGCAGGTTAGCCTTGAGGATGGCAACACGGGACTTCTCATCAGGAAGTGGGATGTAGATGAGCTGATCA
AGACGGCCAGGTCTGAGGATGGCAGGATCAATGATGTCAGGCCGGTTGGTAGCGCCAATGATGAACACATTTTTTTTTGTGGACATGCCA
TCCATTTCTGTCAGGATCTGGTTGATGACTCGGTCAGCAGCCCCACCACCATCTCCAATGTTACCTCCACGAGCCTTGGCAATCGAATCC
AGCTCATCAAAGAATAGCACACAGGGGGCAGCTTGGCGGGCCT (LARGEDELETION)/- TGTCAAAGATTTCTCTGACATTGGCCTC
AGACTCCCCAAACCACATGGTGAGCAGCTCAGGACCCTTGATGGAGATGAAGTTGGCCTGGCATTCATTAGCAATGGCTTTGGCCAACAA
AGTTTTCCCACAGCCAGGAGGTCCATAGAACAGAACTCCCTTGGAAGGTGTCATGCCAAACTTCAGGAATTTGTCTGGGTGCTCCACAGG
ATACTAGGAGGAAAAGGAAAGAGGGTTCAAGGCTACCTCCACATTTTGAAAGAAACCTAACTAAACAGAAGCATCCCCTCCATTATTTCA
TGGTGTACCCAATGGTATCAGATCCAGGTTCTCTAGAAGAAGACTCCTTAGTGCCTCAAACCTAAGAACAGTAGGTTCCTAAGTCGTGCT
CTCACAACTCT-3'

[Top]

RS ID: 71674366 Link_out

Alleles: (LARGEDELETION)/-

Validation:

Not Completed

Details:

Chromosome Reference Position
9 35059798

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_007126 Link_out NP_009057 Link_out 1 Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCCAGTGGAATCTTGTCCAGAAACTAAAGAGCACTCCGTACCAGCCTGAGGACTCATGCAAGTCTCCCACAGCCCATGATCTTGCA
CCTGCCTTGGCAACTGGGGACTTGCGCAGGTTAGCCTTGAGGATGGCAACACGGGACTTCTCATCAGGAAGTGGGATGTAGATGAGCTGA
TCAAGACGGCCAGGTCTGAGGATGGCAGGATCAATGATGTCAGGCCGGTTGGTAGCGCCAATGATGAACACATTTTTTTTTGTGGACATG
CCATCCATTTCTGTCAGGATCTGGTTGATGACTCGGTCAGCAGCCCCACCACCATCTCCAATGTTACCTCCACGAGCCTTGGCAATCGAA
TCCAGCTCATCAAAGAATAGCACACAGGGGGCAGCTTGGCGGG (LARGEDELETION)/- CCTTGTCAAAGATTTCTCTGACATTGGC
CTCAGACTCCCCAAACCACATGGTGAGCAGCTCAGGACCCTTGATGGAGATGAAGTTGGCCTGGCATTCATTAGCAATGGCTTTGGCCAA
CAAAGTTTTCCCACAGCCAGGAGGTCCATAGAACAGAACTCCCTTGGAAGGTGTCATGCCAAACTTCAGGAATTTGTCTGGGTGCTCCAC
AGGATACTAGGAGGAAAAGGAAAGAGGGTTCAAGGCTACCTCCACATTTTGAAAGAAACCTAACTAAACAGAAGCATCCCCTCCATTATT
TCATGGTGTACCCAATGGTATCAGATCCAGGTTCTCTAGAAGAAGACTCCTTAGTGCCTCAAACCTAAGAACAGTAGGTTCCTAAGTCGT
GCTCTCACAAC-3'

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RS ID: 61752947 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
9 35061676

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_007126 Link_out NP_009057 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AACCCATCTCCTCACATCTTAACCTTATGTCTCTAGCCAGTTCCCAGCAACTGCCTAGAGACACTGTAACGCCTGGTCAGCCATCAT
CATCACTTCACCTGTTCCAGGTCCACATCATCTGCCAGCTTCATGTTCTTGGTATGGATCTGAAGAATCTCTAAGCGTCCTGTAGCATCA
GGAATTCCAATATCTACCTCCCT A/G TCAAAGCGACCTGTGGGACAGTACACAAACATAAACAGGGCTCATCTCTAGTCCAGAGGTAA
GAGACAGGCCTAGGGTGACCAACCATCTCAGCCAGCACAGGATTGTCCTAATGCCAGCACTAAAAAAGTCTCAAGCTCTGGGAAACCTTT
CAGTCTCAGGAAAACCAGGGTGGTTGGTCACTCTAGACAGGACGTAGG-3'

[Top]

RS ID: 45537335 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
9 35074490

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004629 Link_out NP_004620 Link_out 3 G [Gly] / G [Gly]
near-gene-5 NM_007126 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAAGAGTTCCCTGGTTTCCCCGATATCCTCAGACACAAAGACCATGACTCTGCTGTTGTGGGTTGCACAGGAGTAGGGGGCAGATGA
TGGACACTGGGATGGGAATGGTTGTGAATGATCTGCCCCCGCTTCCATATGTGAGTGTAGGCAAGATACTTCCTCTCTCTAGGCCTCAGT
TTCCCTTTTTATAAAACAATGCCTAAGACTATGTCAAGTTCTAAGACTCTGTACTCTGGGCTGGGGCTACAGG C/T AATCGAGACACT
TACTTTCACCTGCTTCAGACTCTGAAGAGGCTAGATCGGAGGGATGAGGCCACTGCACTCTGGTGGAGGCTGGAGGCCCAAACTAAGGGG
TCACATGAAGATGCTCTGTGGTGAGGCTCAGGCCTGCTGGCTTGGGGCTGAGGGGCAGTTGGTGTCCTAGAGTCCTTGGACCTATTGTGG
GTGGTGAACACTGAAAGCGGGGGTATGGCTGCCCAGCTTTCTGCCAATCTTTCACCCT-3'

[Top]

RS ID: 34097935 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
9 35062232

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_007126 Link_out NP_009057 Link_out 3 I [Ile] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCTCTCCAGCCTTGCCTGGTGGCTGTCCTGGGATAATGGCTGGTAGAGGATGTGAGAAGTAGGCAGAGGTTACCACCTTCTCACCCA
GGACCTGTCTCTGGGCCAAACAAGCAAGATAACTGATTTTTGGGAGGAATTGGGAAAGACTATCATTTTGTTATTGTCTCCATTCTGTAT
CCTTTCAGGTCCTGAGATCATGAGCAAATTGGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCTTTGAGGAGGCTGAGAAGAATGCTCC
TGCCATCATCTTCATTGATGAGCTAGATGCCAT C/T GCTCCCAAAAGAGAGAAAGTAGGAGCTTACCTGAGGGGATAGAGGGGGGTTG
AAAGGCCCTGACTTCACTTCTGACCAGACATCCTGTTCTGGCAGACTCATGGCGAGGTGGAGCGGCGCATTGTATCACAGTTGTTGACCC
TCATGGATGGCCTAAAGCAGAGGGCACATGTGATTGTTATGGCAGCAACCAACAGACCCAACAGCATTGACCCAGCTCTACGGCGATTTG
GTAAGGACTCCAGATACTTTTGACCCCGTCCTTGCTTAGGTCCTACTTCTCTCCTTCATCTAAGTCAC-3'

[Top]

RS ID: 17878854 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
9 35074166

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004629 Link_out NP_004620 Link_out 2 S [Ser] / F [Phe]
near-gene-5 NM_007126 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ACTCTGGTGGAGGCTGGAGGCCCAAACTAAGGGGTCACATGAAGATGCTCTGTGGTGAGGCTCAGGCCTGCTGGCTTGGGGCTGAGG
GGCAGTTGGTGTCCTAGAGTCCTTGGACCTATTGTGGGTGGTGAACACTGAAAGCGGGGGTATGGCTGCCCAGCTTTCTGCCAATCTTTC
ACCCTTAGGCATCATCCTTCTTTCTCTCCAGGTCTCTCCCCCTGTACCTAGAAAGCTATTTGAGCTGGATCCGTCCCT C/T TGATCGT
GACGCCTTCCTTGAAGAATTTCGGACATCTCTGCCAAAGTCTTGTGACCTGTAGCTGCCACGTTTTGAAGAGCTTGAGCTGGGTCCCCAG
TGGGCTGTCTCTCTGTGGGGAGGGCTTTCTGCTTCACCATCATTAGGAATGTGACCATTCCTATATAATTCCTGGACTGGTGAGATTGGT
GGTAGGCCTGTGAAATTTGCCCTAGTTACTACCATTCTCGTTTTGGAGGAAACAATCTCTGCCACCAC-3'

[Top]

RS ID: 11546022 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
9 35057502

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_007126 Link_out NP_009057 Link_out 2 P [Pro] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGTAATGGGAGGCCTGGGATGAAATCCAGGCTGGGCTTTAACTAGCCCTAGTGATCTGTGTTTACCAACTATAGGAGGTAGAAGAG
GATGATCCAGTGC C/T TGAGATCCGTCGAGATCACTTTGAAGAAGCCATGCGCTTTGCGCGCCGTTCTGTCAGTGACAATGACATTCG
GAAGTATGAGATGTTTGCCCAGACCCTT-3'