SNPJam Report for UGT1A3

Showing coding SNPs for UGT1A3 (Gene ID: 54659)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 7574296 Link_out

Alleles: A/G

Validation:

  • By cluster
  • By frequency
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
2 234638249

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_019093 Link_out NP_061966 Link_out 3 A [Ala] / A [Ala]
intron NM_019075 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019076 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019077 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019078 Link_out Not Applicable Not Applicable Not Applicable
intron NM_007120 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001072 Link_out Not Applicable Not Applicable Not Applicable
intron NM_021027 Link_out Not Applicable Not Applicable Not Applicable
intron NM_205862 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGTCCTCACCCCAGAGGTGAATATGCACATCAAAGAAGAGAACTTTTTCACCCTGAYRACCTATGCCATTTCGTGGACCCAGGATGA
ATTTGATCGCCATGTGCTGGGCCACACTCAACTGTACTTTGAAACAGAACATTTTCTGAAGAAATTTTTCAGAAGTATRGCAATGTTGAA
CAATATGTCTTTGGTCTATCATAGGTCTTGTGTGGAGCTACTACATAATGAGGCCCTGATCAGGCACCTGAATGCTAYTTCCTTTGATGT
GGTTTTAACAGACCCCGTTAACCTCTGCGCGGC A/G GTGCTGGCTAAGTACCTGTCGATTCCTACTGTGTTTTTTTTNGAGGAACATT
NCATGTGATTTAGACTTTAAGGGCACACAGTGTCCAAAYCCTTCCTCCTATATTCCTAGATTACTAACAACCAATTCAGACCACATGACA
TTCATGCAAAGGGTCAAGAACATGCTCTACCCTCTGGCCCTGTCCTACATTTGCCATRCTTTTTCTGCTCCTTATGCAAGCCTTGCCTCT
GAGCTTTTTCAGAGAGAGGTGTCAGTGGTGGATATTCTCAGTCATGCATCTGTGTGGCTGTTCCGAGGG-3'

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RS ID: 6706232 Link_out

Alleles: A/G

Validation:

  • By cluster
  • By frequency
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
2 234637853

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_019093 Link_out NP_061966 Link_out 3 E [Glu] / E [Glu]
intron NM_019075 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019076 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019077 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019078 Link_out Not Applicable Not Applicable Not Applicable
intron NM_007120 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001072 Link_out Not Applicable Not Applicable Not Applicable
intron NM_021027 Link_out Not Applicable Not Applicable Not Applicable
intron NM_205862 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTTTTTCAAGATAGTCATGATCGGTCTTTTCCAGGGTGGGGCCCACAGTGAAAAACAGTGATAGATTAATGGTTAATAATTAACTAG
AGGAGGGCACTCTGTCTTCCAATTACACGTTGATTTGCTAAGTGGCTCAGTGACAAGGTAATTAAGATGAAGAAAGCAAATGTAGCAGGC
ACAGCGTGGGGTGGACAGTCAGCTGTCCGTGTCTTCTGCTGAGATGGCCACAGGACTCCAGGTTCCCCTGCCGTGGCTGGCCACAGGACT
GCTGCTTCTCCTCAGTGTCCAGCCCTGGGCTGA A/G AGTGGAAAGGTGTTGGTGGTGCCCATTGATGGCAGCCACTGGCTCAGCATGC
GGGAGGTCTTGCGGGAGCTCCATGCCAGAGGCCACCAGGCAGTGGTCCTCACCCCAGAGGTGAATATGCACATCAAAGAAGAGAACTTTT
TCACCCTGACAACCTATGCCATTTCGTGGACCCAGGATGAATTTGATCGCCATGTGCTGGGCCACACTCAACTGTACTTTGAAACAGAAC
ATTTTCTGAAGAAATTTTTCAGAAGTATGGCAATGTTGAACAATATGTCTTTGGTCTATCATAGGTCT-3'

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RS ID: 6431625 Link_out

Alleles: C/T

Validation:

  • By cluster
  • By frequency
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
2 234637912

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
intron NM_019075 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019076 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019077 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019078 Link_out Not Applicable Not Applicable Not Applicable
intron NM_007120 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001072 Link_out Not Applicable Not Applicable Not Applicable
intron NM_021027 Link_out Not Applicable Not Applicable Not Applicable
intron NM_205862 Link_out Not Applicable Not Applicable Not Applicable
missense NM_019093 Link_out NP_061966 Link_out 2 V [Val] / A [Ala]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GATAGATTAATGGTTAATAATTAACTAGAGGAGGGCACTCTGTCTTCCAATTACACGTTGATTTGCTAAGTGGCTCAGTGACAAGGT
AATTAAGATGAAGAAAGCAAATGTAGCAGGCACAGCGTGGGGTGGACAGTCAGCTGTCCGTGTCTTCTGCTGAGATGGCCACAGGACTCC
AGGTTCCCCTGCCGTGGCTGGCCACAGGACTGCTGCTTCTCCTCAGTGTCCAGCCCTGGGCTGAGAGTGGAAAGGTGTTGGTGGTGCCCA
TTGATGGCAGCCACTGGCTCAGCATGCGGGAGG C/T CTTGCGGGAGCTCCATGCCAGAGGCCACCAGGCAGTGGTCCTCACCCCAGAG
GTGAATATGCACATCAAAGAAGAGAACTTTTTCACCCTGACAACCTATGCCATTTCGTGGACCCAGGATGAATTTGATCGCCATGTGCTG
GGCCACACTCAACTGTACTTTGAAACAGAACATTTTCTGAAGAAATTTTTCAGAAGTATGGCAATGTTGAACAATATGTCTTTGGTCTAT
CATAGGTCTTGTGTGGAGCTACTACATAATGAGGCCCTGATCAGGCACCTGAATGCTACTTCCTTTGA-3'

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RS ID: 4148323 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
2 234669144

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
intron NM_019075 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019076 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019077 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019078 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001072 Link_out Not Applicable Not Applicable Not Applicable
intron NM_007120 Link_out Not Applicable Not Applicable Not Applicable
intron NM_021027 Link_out Not Applicable Not Applicable Not Applicable
intron NM_205862 Link_out Not Applicable Not Applicable Not Applicable
intron NM_019093 Link_out Not Applicable Not Applicable Not Applicable
missense NM_000463 Link_out NP_000454 Link_out 1 G [Gly] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCAAACATTAACTTGGTGTATCGATTSGTTTTTGCCNNANNNATATNNNNATATATANNAGTAGGAGAGGGCGAACCTCTGGCAGGA
GCAAAGGCGCCATGGCTGTGGAGTCCCAGGGCGGACGCCCACTTGTCCTGGGCCTGCTGCTGTGTGTGCTGGGCCCAGTGGTGTCCCATG
CTGGGAAGATACTGTTGATCCCAGTGGATGGCAGCSACTGGCTGAGCATGCTTGGGGCCATYCAGCAGCTGCAGCAGAGGGGACATGAAA
TAGTTGTCCTAGCACCTGACGCCTCGTTGTACATCAGAGAC A/G GAGCATTTTAMACCTTGAAGACGTACCCTGTGCCAYTCCAAAGG
GAGGATGTGAAAGAGTCTTTTGTTAGTCTCGGGCATAATGTTTTTGAGAATGATTCTTTCCTGCAGCGTGTGATCAAAACATACAAGAAA
ATAAAAAAGGACTCTGCTATGCTTTTGTCTGGCTGTTCCCACTTACTGCACAACAAGGAGCTCATGGCCTCCCTGGCAGAAAGCAGCTTT
GATGTCATGCTGACGGACCCTTTCCTTCCTTGCAGCCCCATCGTGGCCCAGTACCTGTCTCTGCCCACTGTATTCT-3'

[Top]

RS ID: 1042709 Link_out

Alleles: C/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
2 234681134

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_019075 Link_out NP_061948 Link_out 1 A [Ala] / P [Pro]
missense NM_019076 Link_out NP_061949 Link_out 1 A [Ala] / P [Pro]
missense NM_000463 Link_out NP_000454 Link_out 1 A [Ala] / P [Pro]
missense NM_019077 Link_out NP_061950 Link_out 1 A [Ala] / P [Pro]
missense NM_019078 Link_out NP_061951 Link_out 1 A [Ala] / P [Pro]
missense NM_001072 Link_out NP_001063 Link_out 1 A [Ala] / P [Pro]
missense NM_007120 Link_out NP_009051 Link_out 1 A [Ala] / P [Pro]
missense NM_021027 Link_out NP_066307 Link_out 1 A [Ala] / P [Pro]
missense NM_205862 Link_out NP_995584 Link_out 1 A [Ala] / P [Pro]
missense NM_019093 Link_out NP_061966 Link_out 1 A [Ala] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGCCATGAGCATAAAGAGAGGATTGTTCATACCACAGGTGTTCCAGGCATAACGAAACTGTCTTTGTGTTTAGTTACAAGGAGAAC
ATCATGCGCCTCTCCAGCCTTCACAAGGACCGCCCGGTGGAGCCGCTGGACCTGGCCGTGTTCTGGGTGGAGTTTGTGATGAGGCACAAG
GGCGCGCCACACCTGCGCCCCGCAGCCCACGACCTCACCTGGTACCAGTACCATTCCTTGGACGTGATTGGTTTCCTCTTGGCCGTCGTG
CTGACAGTGGCCTTCATCACCTTTAAATGTTGT C/G CTTATGGCTACCGGAAATGCTTGGGGAAAAAAGGGCGAGTTAAGAAAGCCCA
CAAATCCAAGACCCATTGAGAAGTGGGTGGGAAATAAGGTAAAATTTTGAACCATTCCCTAGTCATTTCCAAACTTGAAAACAGAATCAG
TGTTAAATTCATTTTATTCTTATTAAGGAAATACTTTGCATAAATTAATCAGCCCCAGAGTGCTTTAAAAAATTCTCTTAAATAAAAATA
ATAGACTCGCTAGTCAGTAAAGATATTTGAATATGTATCGTGCCCCCTCTGGTGTCTTTGATCAGGAT-3'