SNPJam Report for TNNC2

Showing coding SNPs for TNNC2 (Gene ID: 7125)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 11538663 Link_out

Alleles: C/T

Validation:

  • By hap map

Details:

Chromosome Reference Position
20 44453229

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003279 Link_out NP_003270 Link_out 2 I [Ile] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGAGTTCAAGGCTGCCTTTGACATGTTTGATGCTGATGGTGGTGGGGACA C/T CAGCGTCAAGGAGTTGGGCACGGTGATGAGGA
TGCTGGGCCAGACACCCA-3'

[Top]

RS ID: 1804548 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
20 44453008

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003279 Link_out NP_003270 Link_out 3 M [Met] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCGACTTCGAGGAGTTCTTGGTCAT G/T ATGGTGCGCCAGATGAAAGAGGACG-3'

[Top]

RS ID: 4629 Link_out

Alleles: G/T

Validation:

  • By frequency
  • By 2 hit 2 allele
  • By cluster

Details:

Chromosome Reference Position
20 44452697

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_003279 Link_out NP_003270 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAGAGGCGGCAGCGGCTGGGCTCAGGCTCAGTCTGCCACCTGCTGCCCGCAGGCAGCGGCACCATCGACTTCGAGGAGTTCTTGGTC
ATGATGGTGCGCCAGATGAAAGAGGACGCGAAAGGGAAGAGCGAGGAGGAGCTGGCCGAGTGCTTCCGCATCTTCGACAGGTGCGCTGGG
GGCCCGGGAGCCGAGGGAGGGGCTTAGCAGTCAGAACCCGGCCGGCAGCGCTGGAAGCTTCCCCGTGTTGGGAGTGCGGAAGCGGGGCGT
CGAGTGTGGTGGCCAGGGCAGCTCGCCCCGGCCCTGAGCCCTGCCCTGTCCCTCGGACCTGAAGGAATGCAGACGGCTACATCGACCCGG
AGGAGCTGGCTGAGATTTTCAGGGCCTCCGGGGAGCACGTGAC G/T GACGAGGAGATCGAATCTCTGATGAAAGACGGCGACAAGAAC
AACGACGGCCGCATTGACTTCGACGGTGAGGGCCAACGGGAGCTTGGGAAGAGCGGGTGGGAGCCCCAGAGGACGGCGGGCACTGGTGCC
TGGCTCCGGTGCAGTGTCCTTGGCCTTGTGGGCTGGGCTGGGCGTAACTTCACCAAGTTCCCCATAGTCTCCTGGGGGCAGGTATAGAAG
CGCTCCACGACTCTGTGCAGTTTATCAATTAATGACCAGGCAGGGgggcgtggtggctcaggactgtaaaatcctagaactttgggagga
tgaggtgggaggattgcttgaggccaagagttcgagaccagcctgggcaacatagtgagaccctgtctttacaaaaaataAAATAAAA-3
'