SNPJam Report for SLCO4C1

Showing coding SNPs for SLCO4C1 (Gene ID: 353189)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 116920471 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101576433

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 2 L [Leu] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGGTAGGTTAAAAGTATGCAATAAGTAAATAATCCTATATCTGAAACATTGGAAAATGGCTTCCTTCAACAAGAATGATGTAGCCTT
CCACTATAATTTTTTTTGCCACAGGCCATAAATTAAAAAATAAATAACACTAATGAACCAAAATAGCCAACAGTTAGCAATGAATAAAGA
AAAATGGCATACCTAATAATCGA A/G GGACCATAAATTGTATTCCCAAGGCTAGGGACCGTTGTCTGTGATTAACACACCTGGAAATA
TTAAATATATATGAGACCAAAAAAGGTGGTATAGTATATTCACTCTTTGAGCAAGTTCACATTTATAAGAGTTTAGCATTCCTATATTAA
AGTAAATGTTGTAAACGCAAAATAATGCATTTGTAAGAGCTTATAAAT-3'

[Top]

RS ID: 116309895 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101592890

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_180991 Link_out NP_851322 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTTACATAGGAAAAAAGGTCTTCCAAATTTTTAAAAAGCCAATTTCTCACCATTTAAGAAAACATATGCTTGGAAATGCTTAGTCTA
TTATTCTGGTATTAATATCAAAAAGCACTGAATTGTATTTACCCATTATATGATTCAGATACACCAGCAAATGGCTCATTTTCACATTTG
GCATACATAAATACAAAACTCAG C/T GTAAGTGCAACTCCAGATGTGAACAGTGCAAACTTCATTGTGTTTTTACATGTCATTCTGAA
TTTTGAAACAAGGAAGCCACCTAAAATTTGACCGAGAGCAGCTCCAGGAATTAAAACAGCCCCTAATAAGAAAAAAGAATGTAGATTGTG
AGAAACCATACACATATACTCACTCATACTGACAACTGGAAAACATCA-3'

[Top]

RS ID: 115008850 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101574970

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 1 M [Met] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CATCTGTTCAAAGCCTTTCATAACATGCTGTGATAAATGTTCTCTGCTTCAGGAAGACTACTGGATGGTTCAACAATGTGGACTGAA
CATTTCAAAATACCTGTGACCCTAAGTAACCAACAATGAGATTTTTTTTTTTTTACATCCTTAGTTTACTCTAAAATTATCAAGAAGTCA
CCACTTACTTATGGCTACTAGCA G/T ATGGGCCATCTTGATGTTATCATAAATCCAGCAAGCTCCTTTAATTCCACAATCATTTATAT
CCCAAAGAATACATGTGCTGTCTATTGTGAAACCAAATATAATTGGTCCAGGAATTGTCCCTAAAAGAATTATGGGTGAAATATACAACA
GTAAAGATTACAGTTTAGAATTACAGATCTTTTTATACATGATCATAC-3'

[Top]

RS ID: 111930513 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101575045

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 1 C [Cys] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATGTGGACTGAACATTTCAAAATACCTGTGACCCTAAGTAACCAACAATGAGATTTTTTTTTTTTTACATCCTTAGTTTACTCTAAA
ATTATCAAGAAGTCACCACTTACTTATGGCTACTAGCATATGGGCCATCTTGATGTTATCATAAATCCAGCAAGCTCCTTTAATTCCACA
ATCATTTATATCCCAAAGAATAC A/G TGTGCTGTCTATTGTGAAACCAAATATAATTGGTCCAGGAATTGTCCCTAAAAGAATTATGG
GTGAAATATACAACAGTAAAGATTACAGTTTAGAATTACAGATCTTTTTATACATGATCATACATATATTTTATAGAAATAAAAATAAGT
ATTCATCTGTCCACATGCAAATTAATTCATGTACAAGTCAAAGAAATA-3'

[Top]

RS ID: 80131933 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 101583110

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 1 E [Glu] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAACATGTTGCCTTAGGGAATGAAAATTTCTCAACGTGCTACATACCTTAGGATAGACACAGTTATAGGAGTACCGGCCATAAAGGT
AAAAATAATTACAATAAAGAAAATGCAAAGGAATATGGGCAGTTTCGCACAATGAGTTTCACATTTTCCAGCTTTAGCTTCAAAACCAAA
AGTTTCTGCAGTGGATGTTATTT C/T TGTTTTCCTTTCAATACAGGAACAGTTGTAATATACCTAAAAATATTAGACATAAAAACAAT
GAAAGTGATCATTTAGAAAATAAATTATTGTAAATTAGGTATTCTCTAGACATGGCAAACACTCTCATACTGTCTTAATCCATATTCAAC
AAATTATGCTGAGAGAATATTTAACCCTTAAGAAATTAAGCAAGTGGA-3'

[Top]

RS ID: 78665918 Link_out

Alleles: A/G

Validation:

  • By frequency

Details:

Chromosome Reference Position
5 101585370

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 2 S [Ser] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCAAGAGGCATGAAGGAAAAAGAATCTATTTCAGCTGGAGACATCATGGGCTGCTTAACGGAGGCAATGGAGCAGGAAGGCAAGAAT
AGGCATTGCATAACCCCATTAGAGAAGTCAAGATAATCCACAAACATATTGCCTCATTAAGGGAAAAGTAGGAGACATAAGCTACCTTTG
GCTTCCTGTGTGCAACTGGGTTT A/G AACAGCCTGCAAAGCAGGGAGAAAAATATTGGACTCCATCTCCACAGACAGGATAATAATAT
GATCGCGAACAGTTACAATTGGCATTACAAGGGGCTATCAAGTTTCCCAATTCTCCAGTCCTGTAAATAAGAAATGAAAGAAGGGTAAAT
GATCTGTCATAACTTTTAACTAACAATTTCGAAGCACTGTTATATCTT-3'

[Top]

RS ID: 76381196 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101631761

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_180991 Link_out NP_851322 Link_out 2 N [Asn] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCCCACCTCGCTCTCCACTGGCCCGAGCCTCAAGCGGGCGCTGGACTTTACCTTGCGTGACGGCCAAGAGGCAGTAGTGAAGCAGAA
AGCCTCCAGGTGTGTTGCAGCGCTGGAGACATTGAGGATGGAAGTTCCTCCAGCCGTAAGACCCCTCCTCAAACTCGGACAGCGACAGTG
ACCGGAGCTTCTCTTCGGAGACA C/T TGGGAGGGGCTGAAGGCAGAGATGGCTCTGGTGACTTCTGGGGCTCCTGGGGCTTCTGAAGC
TCCTGTGGCTGAGAATTCTCTCTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTTGGGAGGGCGACGCAGACAAGCGGCGCAGGATG
TCTGGGCTGGAGGGGACAAAAGCCAAGTTCTCAATACCTTTGGCGCTC-3'

[Top]

RS ID: 62372168 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101631925

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_180991 Link_out NP_851322 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GACATTGAGGATGGAAGTTCCTCCAGCCGTAAGACCCCTCCTCAAACTCGGACAGCGACAGTGACCGGAGCTTCTCTTCGGAGACAT
TGGGAGGGGCTGAAGGCAGAGATGGCTCTGGTGACTTCTGGGGCTCCTGGGGCTTCTGAAGCTCCTGTGGCTGAGAATTCTCTCTTTGGG
GGTCAGAGGACAAGGCAGAGACTTCGATTTGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTGGGCTGGA A/G GGGACAAAAGCC
AAGTTCTCAATACCTTTGGCGCTCTTCATGTCTGGATGGGTTCTCCCGACTCCGGTGCTTCAGAGCAGCAGAGCCAGGTCCCTCTCTGGC
TCCTCCCACAGGCAGGTGACAGCGCCCCCGTGCGGGAAGCTTCCCGCCTCCTGGCCCTCCAGCCTCCAGCGCACTCTCCGCCACCGCCTG
AACCTTCCTACTCCAGCTCGCAGCTGTCTGGAGCGCAGAGCGCTGAGCGGGGGCGTTA-3'

[Top]

RS ID: 62370437 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101575091

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_180991 Link_out NP_851322 Link_out 3 G [Gly] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AACAATGTGGACTGAACATTTCAAAATACCTGTGACCCTAAGTAACCAACAATGAGATTTTTTTTTTTTTACATCCTTAGTTTACTC
TAAAATTATCAAGAAGTCACCACTTACTTATGGCTACTAGCATATGGGCCATCTTGATGTTATCATAAATCCAGCAAGCTCCTTTAATTC
CACAATCATTTATATCCCAAAGAATACATGTGCTGTCTATTGTGAAACCAAATATAATTGGTCCAGGAATTGT C/T CCTAAAAGAATT
ATGGGTGAAATATACAACAGTAAAGATTACAGTTTAGAATTACAGATCTTTTTATACATGATCATACATATATTTTATAGAAATAAAAAT
AAGTATTCATCTGTCCACATGCAAATTAATTCATGTACAAGTCAAAGAAATATAAAGCAGATACAATATTCTAAAATAATTATATGTAAT
TACTATGTATTTCTAATCAATTCAAAAAAGTATTTCAATAGAAATATCCAATATATAT-3'

[Top]

RS ID: 10479190 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 101631790

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_180991 Link_out NP_851322 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCACCTTGCAGGGCGCGTCCACCGTCCCACGGACCCGGCGCACCTGCCCTCTCCCCCGGCTGGCTCGCCGTGCCCACCTCGCTCTCC
ACTGGCCCGAGCCTCGAGCGGGCGCTGGACTTTACCTTGCGTGACGGCCAAGAGGCAGTAGTGAAGCAGAAAGCCTCCAGGTGTGTTGCA
GCGCTGGAGACATTGAGGATGGAAGTTCCTCCAGCCGTAAGACCCCTCCTCAAACTCGGACAGCGACAGTGACCGGAGCTTCTCTTCGGA
GACATTGGGAGGGGCTGAAGGCAGAGATGGCTC G/T GGTGACTTCTGGGGCTCCTGGGGCTTCTGAAGCTCCTGTGGCTGAGAATTCT
CTCTTTGGGGGTCAGAGGACAAGGCAGAGACTTCGATTTGGGAGGGCGACGCAGACAAGCGGCGCAGGATGTCTGGGCTGGAGGGGACAA
AAGCCAAGTTCTCAATACCTTTGGCGCTCTTCATGTCTGGATGGGTTCTCCCGACTCCGGTGCTTCAGAGCAGCAGAGCCAGGTCCCTCT
CTGGCTCCTCCCACAGGCAGGTGACAGCGCCCCCGTGCGGGAAGCTTCCCGCCTCCTGGCCCTCCAGC-3'