SNPJam Report for SCNN1D

Showing coding SNPs for SCNN1D (Gene ID: 6339)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 6690013 Link_out

Alleles: A/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
1 1226757

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002978 Link_out NP_002969 Link_out 1 G [Gly] / S [Ser]
missense NM_001130413 Link_out NP_001123885 Link_out 1 G [Gly] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CGCCCGTGTACTCGGTGAGCCTTGGCCCCCTGCCTGGGCTAGAGCGGGGGCAGCGACAGTGGCTGGCCCTGCACAGAAGGGGCACGG
GGGCCTGGGCCCGCCCCTCACACCCGCACCCCACCCGCAGGTGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGG
GGCCTCCGTCCTCTCCCTCCTGGAGCTCCTGGAGCTGCTGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGC A/G GCCGCCGGCTCC
GCAGGGCGTGGTTCTCCTGGCCCAGAGCCAGCCCTGCCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCTGCAG
GCGGCACGTCAGATGACCCGGAGCCCAGCGGGCCTCATCTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGAGTCTCAGCCGAAGAGA
GCTGGGCTGGGCCCCAGCCCCTTGAGACTCTGGACACCTGAACCAGACCTGCCAGGGC-3'

[Top]

RS ID: 2273276 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By hap map
  • By cluster

Details:

Chromosome Reference Position
1 1226292

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002978 Link_out NP_002969 Link_out 3 T [Thr] / T [Thr]
coding-synonymous NM_001130413 Link_out NP_001123885 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ACCCACCGGCTCCCCTGTACCTCCCGCTGCCCCAGGCCCTGCAGGTGAGACGGGGGTGTTGGGGTCGCGGCCAGGGATCATTGCCCC
AGGTAGCGTGGCAGGTGACACCCGGCTGTCTCTTCCAGGGAGTCTGCATTCAAGCTCTCCACTGGGACCTCCAGGTGGCCTTCCGCCAAG
TCAGCTGTGAGTCCCCAAAGTGGTGGGGTGGGGGTGTGGACAGCCAGGCAGACCCCACAGGTCCCACAGAGCCCACCCAAGACAAGGGCA
GGGCCGGAACTGACCCAGCCTATGCCCCGTGGTCTCTGCCCCCACATCCGCCCGTGGTACCCAGGATGGCCGGGGGCATGGGGGAGCCGT
GGCCACAGCAAACCTTCCGTCTGCAGGGATGGACTCTGGCCAC A/G CTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAGG
TGGGTGCACCCTCCCCCTCCAGAGAGGCATCACAGCCCCTCTCCCCTCAAAGCCCCCCTCCCCATCATGAAGGTCTGGGCCAGCGCCCTC
ATGCCTCTATCCTGCCCCAGGAGCAGCCTGGCCAAAATCAACATCGTCTACCAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCCGTG
TACTCGGTGAGCCTTGGCCCCCTGCCTGGGCTAGAGCGGGGGCAGCGACAGTGGCTGGCCCTGCACAGAAGGGGCACGGGGGCCTGGGCC
CGCCCCTCACACCCGCACCCCACCCGCAGGTGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTGTGGTTTGGGGCCTCCGT-3
'

[Top]

RS ID: 2229833 Link_out

Alleles: C/G

Validation:

  • By hap map

Details:

Chromosome Reference Position
1 1226651

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002978 Link_out NP_002969 Link_out 3 S [Ser] / S [Ser]
coding-synonymous NM_001130413 Link_out NP_001123885 Link_out 3 S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATGGACTCTGGCCACGCTAGGTGAACAGGGGCTGCCGCATCAGAGCCACAGACAGAGGAGCAGCCTGGCCAAAATCAACATCGTCTA
CCAGGAGCTCAACTACCGCTCAGTGGAGGAGGCGCCCGTGTACTCGGTGCCGCAGCTGCTCTC C/G GCCATGGGCAGCCTCTACAGCC
TGTGGTTTGGGGCCTCCGTCCTCTCCCTCCTGGAGCTCCTGGAGCTGCTGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCGGCCGCC
GGCTCCGCAGGGCGTGGTTCTCCTGGCCCAGAGCCAGC-3'

[Top]

RS ID: 2229832 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
1 1222506

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002978 Link_out NP_002969 Link_out 3 G [Gly] / G [Gly]
coding-synonymous NM_001130413 Link_out NP_001123885 Link_out 3 G [Gly] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAACCTCAGCAAAGGCAGAGCCGCCCTCTCCGCCACTGTCCCCCGCCACGAGCCCCCCTTCCACCTGGACCGGGAGATCCGTCTGCA
GAGGCTGAGCCACTCGGGCAGCCGGGTCAGAGTGGGGTTCAGACTGTGCAACAGCACGGGCGG C/T GACTGCTTTTACCGAGGCTACA
CGTCAGGCGTGGCGGCTGTCCAGGACTGGTACCACTTCCACTATGTGGATATCCTGGCCCTGCTGCCCGCGGCATGGGAGGACAGCCACG
GGAGCCAGGACGGCCACTTCGTCCTCTCCTGCAGTTAC-3'

[Top]

RS ID: 2229831 Link_out

Alleles: A/T

Validation:

Not Completed

Details:

Chromosome Reference Position
1 1221436

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002978 Link_out NP_002969 Link_out 2 N [Asn] / I [Ile]
missense NM_001130413 Link_out NP_001123885 Link_out 2 N [Asn] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGGGGGGCTCTCACCTCCAGGCTGCAGCCCAGACGCCCCCCAGGCCGGGGccaccatcagcaccaccaccaccaccCAAGGAGGGGC
ACCAGGAGGGGCTGGTGGAGCTGCCCGCCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA A/T TGCCACCATCCACGGCGCCATC
CGCCTGGTCTGCTCCCGCGGGAACCGCCTCAAGACGACGTCCTGGGGGCTGCTGTCCCTGGGAGCCCTGGTCGCGCTCTGCTGGCAGCTG
GGGCTCCTCTTTGAGCGTCACTGGCACCGCCCGGTCCT-3'

[Top]

RS ID: 1053844 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
1 1226668

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002978 Link_out NP_002969 Link_out 2 C [Cys] / Y [Tyr]
missense NM_001130413 Link_out NP_001123885 Link_out 2 C [Cys] / Y [Tyr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGCGCCCGTGTACTCGGTGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCT A/G CAGCCTGTGGTTTGGGGCCTCCGTCCTCTCCC
TCCTGGAGCTCCTGGAGC-3'

[Top]

RS ID: 609805 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By 2 hit 2 allele
  • By cluster

Details:

Chromosome Reference Position
1 1226889

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002978 Link_out NP_002969 Link_out 1 G [Gly] / R [Arg]
missense NM_001130413 Link_out NP_001123885 Link_out 1 G [Gly] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CACGGGGGCCTGGGCCCGCCCCTCACACCCGCACCCCACCCGCAGGTGCCGCAGCTGCTCTCGGCCATGGGCAGCCTCTGCAGCCTG
TGGTTTGGGGCCTCCGTCCTCTCCCTCCTGGAGCTCCTGGAGCTGCTGCTCGATGCTTCTGCCCTCACCCTGGTGCTAGGCGGCCGCCGG
CTCCGCAGGGCGTGGTTCTCCTGGCCCAGAGCCAGCCCTGCCTCAGGGGCGTCCAGCATCAAGCCAGAGGCCAGTCAGATGCCCCCGCCT
GCAGGCGGCACGTCAGATGACCCGGAGCCCAGC A/G GGCCTCATCTCCCACGGGTGATGCTTCCAGGGGTTCTGGCGGGAGTCTCAGC
CGAAGAGAGCTGGGCTGGGCCCCAGCCCCTTGAGACTCTGGACACCTGAACCAGACCTGCCAGGGCTGTGCGATCTCTTGGCCTGGTCCT
TGCAGCTGTGGCAGCAGCAGGCTCCCCAGCGGCCCAGGGTGGGCCAGACCAGCAGCCCAGGAAGCAGCACACGCGGCCGTGGGGAGGCAG
GCACCGGGCATGTCGGCGCCTCTGGTCAAACCACCTACACTGCCTGGGGTGGGTCTCAAGGAGGCCCG-3'