SNPJam Report for NR3C1

Showing coding SNPs for NR3C1 (Gene ID: 2908)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 258751 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142662280

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000176 Link_out NP_000167 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001024094 Link_out NP_001019265 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001018074 Link_out NP_001018084 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001018075 Link_out NP_001018085 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001020825 Link_out NP_001018661 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001018076 Link_out NP_001018086 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001018077 Link_out NP_001018087 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TAATTGCTGGAATAAACACTGTTGTTGAAGCCTTCTATCTATCTCAGTACTAGAATTAAACTCAAGTGCAGAATGGCAGACAAAGTT
AACTAAAAATCACtgtattatttcatttggtcctccaaatagctttgtgagctaaggaggagaaggtgtatcatcaccacttccatttta
tagatgagaaaTCAAGTGATTTACTCAAGGTTAAGTCCTCCAATTCTTTGTTATCCTGCATTTTCTCTTGGCTGTAGTTTAATTAATAAT
CCTAAGAAAATGCTTATATTTTAGAGTGCAGTAAGAGTACATAAACAATGTTAAATGCCCATCTTGCATGTATAAAAAGTTATAGCAAGA
AATCTggctgggaatggtggctcacacctgtaatcctggcactttgggaggccgaggcaggaggattgcttgagcccaggagtttaagac
cagcctgggcaacatagggagatcctgtctctacaaaaaaatttagccagacacagtggcttgtgtcctagctactcaggaggctgaggt
gggaggatcacttgagccaaggaggtcaaggctccagtgagctatgattatgccactcagacatggtggcttgtgcctacagtcctagct
actcaggaggctgaggtgggaggatcacttgagccaaggaggtcaaggctccagtgagctatgattatgccactgcactccagcctggat
gacacagtgagaccctatctatctcaaaaaaaaaaaaaaaagaaaagaaaagaaaAAGAAAATCCTTTAACTGACTTCATCTTAACCTTT
TAGTTCCTAAGGA C/T GGTCTGAAGAGCCAAGAGCTATTTGATGAAATTAGAATGACCTACATCAAAGAGCTAGGAAAAGCCATTGTC
AAGAGGGAAGGAAACTCCAGCCAGAACTGGCAGCGGTTTTATCAACTGACAAAACTCTTGGATTCTATGCATGAAGTAAGTGTCAAACAT
AAAGCCAAATATAAGAGTTTTCTGGGACAAAGTATGTT-3'

[Top]

RS ID: 33391 Link_out

Alleles: C/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
5 142680246

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000176 Link_out NP_000167 Link_out 3 N [Asn] / K [Lys]
missense NM_001024094 Link_out NP_001019265 Link_out 3 N [Asn] / K [Lys]
missense NM_001018074 Link_out NP_001018084 Link_out 3 N [Asn] / K [Lys]
missense NM_001020825 Link_out NP_001018661 Link_out 3 N [Asn] / K [Lys]
missense NM_001018075 Link_out NP_001018085 Link_out 3 N [Asn] / K [Lys]
missense NM_001018076 Link_out NP_001018086 Link_out 3 N [Asn] / K [Lys]
missense NM_001018077 Link_out NP_001018087 Link_out 3 N [Asn] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGCTATCATATCCTGCATATAACACTTCAGGTTCAATAACCTCCAACAGTGACACCAGGGTAGGGGTGAGTTGTGGTAACGTTGCAG
GAACTATTGTTTT C/G TTACCAGGATTTTCAGAGGTTTCTTGTGAGACTCCTGTAGTGGCCTGCTGAATTCCTTTTATTTTTTTCTTT
GTTTTTCGAGCTGTGGGTATTTAAACAA-3'

[Top]

RS ID: 6199 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142779601

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000176 Link_out NP_000167 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001024094 Link_out NP_001019265 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001018074 Link_out NP_001018084 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001018075 Link_out NP_001018085 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001020825 Link_out NP_001018661 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001018076 Link_out NP_001018086 Link_out 3 P [Pro] / P [Pro]
coding-synonymous NM_001018077 Link_out NP_001018087 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCCTTTTGGAAGGAAACTCGAATGAGGACTGCAAGCCTCTCATTTTACCGGACACTAAACCCAAAATTAAGGATAATGGAGATCTGG
TTTTGTCAAGCCC C/T AGTAATGTAACACTGCCCCAAGTGAAAACAGAAAAAGAAGATTTCATCGAACTCTGCACCCCTGGGGTAATT
AAGCAAGAGAAACTGGGCACAGTTTACT-3'

[Top]

RS ID: 6196 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142661490

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000176 Link_out NP_000167 Link_out 3 N [Asn] / N [Asn]
coding-synonymous NM_001024094 Link_out NP_001019265 Link_out 3 N [Asn] / N [Asn]
coding-synonymous NM_001018074 Link_out NP_001018084 Link_out 3 N [Asn] / N [Asn]
coding-synonymous NM_001018075 Link_out NP_001018085 Link_out 3 N [Asn] / N [Asn]
coding-synonymous NM_001018076 Link_out NP_001018086 Link_out 3 N [Asn] / N [Asn]
coding-synonymous NM_001018077 Link_out NP_001018087 Link_out 3 N [Asn] / N [Asn]
intron NM_001020825 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TAAACTTTTTTTCAGGTTTCCATGCATAAATCAAAAATGCTATCCTAACTATACAGGGGGGGGATACACCAACAGAAAGTCTAGAAA
ATTTCATCCAGCCAACTGTGAAAAAAAGTATGAAGAGAAAGTTCATCACACAGACTTTGGGCACTGGTGGTTTAGGTGCCATCCTTCTTT
GACTGTGGAGATTACGTCCACATATTAAGGTTTCTAATTTCTGGGATATATTAACTAATAAATTTCACCATCTACTCTCCCATCACTGAA
AAGTGATGACGACTCAACTGCTTCTGTTGCCAAGTCTTGGCCCTCTATAAACCACATGTAGTGCGTATTTAAAACAAAACAACAGATGAA
AACAATAAAAAATAAAACAACAAAACCTCTACAGGACAAACTGATAGTTTATACAATAAAAGCTATTAATTCGACTTTCTTTAAGGCAAC
CATTCTTATTAAGGCAGTCACTTTTGATGAAACAGAAGTTTTTTGATATTTCC A/G TTTGAATATTTTGGTATCTGATTGGTGATGAT
TTCAGCTAACATCTCGGGGAATTCAATACTCATGGTCTTATCCAAAAATGTTTGGAAGCAATAGTTAAGGAGATTTTCAACCACCTGCAA
GAGAAGATATGGTAATGATCAGGCTTCCAAATTGGTCAGTGGGAACATCTCATGTTTGTTGTCCTCTATTTTGAAAAAATTATCTGGCCT
AGAATATACCAATCTCACTGGAATTCCCCAGATGAAAAATAAGCACTTCCGTACAAAACACATTTTATATTTCTTTGATTGTATGTAGAA
TTATATAGAATTATTTCATGAATCACTGTAGTACCATAATATATGAAGGGTGCATTATTCTAATTTAATGGATTAATCATACTTTTTAAA
AACAGTATTACTAAATTCTGTAATAACATGGTGATTTTATATACACATGACTAGGTGAAAGGATATTTCATAATTGGCCTTAGGAAAAAT
GTCTACAAAACTGAAGTTC-3'

[Top]

RS ID: 6194 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By hap map
  • By cluster

Details:

Chromosome Reference Position
5 142678361

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000176 Link_out NP_000167 Link_out 3 H [His] / H [His]
coding-synonymous NM_001024094 Link_out NP_001019265 Link_out 3 H [His] / H [His]
coding-synonymous NM_001018074 Link_out NP_001018084 Link_out 3 H [His] / H [His]
coding-synonymous NM_001018075 Link_out NP_001018085 Link_out 3 H [His] / H [His]
coding-synonymous NM_001020825 Link_out NP_001018661 Link_out 3 H [His] / H [His]
coding-synonymous NM_001018076 Link_out NP_001018086 Link_out 3 H [His] / H [His]
coding-synonymous NM_001018077 Link_out NP_001018087 Link_out 3 H [His] / H [His]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCTCATCTACAATTGTCCCCACTGAATCCACATGAGTTTTACCATGCTCCTTTTTCTTTCTGGAATAGGGTTATGTAAATGATATCA
CAGTAAGATTCCTTGTTGCTTGCGACAGACTTTACTAACCTCAGATATGCTGTTAAATATCCTCAAACATGTCCTGGGACAGTAATAATG
CCACATGTACATTTGCTTTACATTACACTTGTCCTGCCCCAAGCACTCATAACTCTATTTCCAGTTTGCCTAGATCCTAGATACCTAGTA
GGATTGTTTCAGTCCTGAATTATCACAATAGCAGTCAATCAGGAAAACATCAGCTGGTTAAAGATACCCTATGAATACAGGGAAAATGAC
ACACATACAACTTACTCATTAATAATCAGATCAGGAGCAAAACACAGCAGGTTTGCACTTGATTGTCTATATGATCTCCACCCCAGAGCA
AATGCCATAAGAAACATCCAGGAGTACTGCAGTAGGGTCATTTGGTCATCCAG A/G TGTAAGTTCCTGAAACCTGAATTAAGAGAAAT
AAAGGTATGAGGCAACACTCTTCAGAAGATCATCTCTGTGGGAATTGCCAAGGAGCAATGAGATCAATTAGCCCTGTCAAAACAAGGGCA
CCCCTAACAGAAAATGGAAATTAAATACTAGGTAGACACAGTTTTCTTCTGTCATCTGACACTTTAAGACTCACAAACCCTCTTGTGTTT
TTTTTTTTTTTTTTTTTTTTAATTGAGACAAAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGTGCCATCTCGGCTCACTGCAACCT
CCGCCTCCCGGGTTCAAGTGATTCTCAGTGCCAGCCTCCCAAGTAGCTAGGAATACAGATTCATACCACCATGCCCGGCTAATTTTTGTA
ATTTTAGTAGAGATGGGGTTTTGCTATGCTGGCCAGGCTGGTCTCGAACTCCTGACCTCAACTGATCCACCCACCTGGGCTTCCCAAAGT
GCTGGGATTACAGGCGTGA-3'

[Top]

RS ID: 6192 Link_out

Alleles: G/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142780212

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000176 Link_out NP_000167 Link_out 1 F [Phe] / V [Val]
missense NM_001024094 Link_out NP_001019265 Link_out 1 F [Phe] / V [Val]
missense NM_001018074 Link_out NP_001018084 Link_out 1 F [Phe] / V [Val]
missense NM_001018075 Link_out NP_001018085 Link_out 1 F [Phe] / V [Val]
missense NM_001020825 Link_out NP_001018661 Link_out 1 F [Phe] / V [Val]
missense NM_001018076 Link_out NP_001018086 Link_out 1 F [Phe] / V [Val]
missense NM_001018077 Link_out NP_001018087 Link_out 1 F [Phe] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATTTAACAAGCTGCCTCTTACTAATCRGATCAGGAAGATAATGTGACTTTAGAGCTTATGATGTTTTCCCCCCGTTTTTGTTTTTTG
TTTTGTAGTTGATATTCACTGATGGACTCCAAAGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCTTGCTCAGGARARG
GGAGATGTGATGGACTTCTATAAAACCCTAAGAGGAGGAGCTACTGTGAAGGTTTCTGCGTCTTCACCCTCACTGGCTGTCGCTTCTCAA
TCAGACTCCAAGCAGCGAAGACTTTTGGTTGAT G/T TTCCYAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGT
TTCACTCTCAATGGGACTGTATATGGGAGAGACAGAAACAAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCT
TTCCTCGGGGGAAACAGACTTAAAGCTTTTGGAAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTC
AGCATCCACTGCTGTGTCTGCTGCCCCCACAGAGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTT-3'

[Top]

RS ID: 6190 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142780337

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000176 Link_out NP_000167 Link_out 2 R [Arg] / K [Lys]
missense NM_001024094 Link_out NP_001019265 Link_out 2 R [Arg] / K [Lys]
missense NM_001018074 Link_out NP_001018084 Link_out 2 R [Arg] / K [Lys]
missense NM_001018075 Link_out NP_001018085 Link_out 2 R [Arg] / K [Lys]
missense NM_001020825 Link_out NP_001018661 Link_out 2 R [Arg] / K [Lys]
missense NM_001018076 Link_out NP_001018086 Link_out 2 R [Arg] / K [Lys]
missense NM_001018077 Link_out NP_001018087 Link_out 2 R [Arg] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCGTGATTGAAAAGAGGTAGGAATTTTAATGATCACACTTCCTTTTTTTGAAATTAAATACTTTGACATCAACTTGAACCTTCAGAA
TAATCAGATGTAATGAATTATAATGTCTGTGATTAACAAAGCTACACGTTCAGTGAGCGGCAGGATGAATAGCCAAGCTTAGTTCGATAC
ACTTTTGCCCTCAGCTGTGCAAATGGATTGCATTGTACTTTTAAATGTGGCATGCTGAATGGGAGCAGGGGACATGGCTTTTTATTCTGG
AAGATAGAAACTACTCTTCTGGTAACAAAGAATTTGATTCGGAGTTAACTAAAAGGTTCATTTAACAAGCTGCCTCTTACTAATCGGATC
AGGAAGATAATGTGACTTTAGAGCTTATGATGTTTTCCCCCCGTTTTTGTTTTTTGTTTTGTAGTTGATATTCACTGATGGACTCCAAAG
AATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCTTGCTCAGGAGA A/G GGGAGATGTGATGGACTTCTATAAAACCCTA
AGAGGAGGAGCTACTGTGAAGGTTTCTGCGTCTTCACCCTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTTTGGTT
GATTTTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAATGGGACTGTATATGGGAGAGACA
GAAACAAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCTTTTGGAA
GAAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTGCCCCCACAGAG
AAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAATTG
TATACCACAGACCAAAGCA-3'

[Top]

RS ID: 6189 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
5 142780339

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000176 Link_out NP_000167 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001024094 Link_out NP_001019265 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001018074 Link_out NP_001018084 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001020825 Link_out NP_001018661 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001018075 Link_out NP_001018085 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001018076 Link_out NP_001018086 Link_out 3 E [Glu] / E [Glu]
coding-synonymous NM_001018077 Link_out NP_001018087 Link_out 3 E [Glu] / E [Glu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGCCGTGATTGAAAAGAGGTAGGAATTTTAATGATCACACTTCCTTTTTTTGAAATTAAATACTTTGACATCAACTTGAACCTTCAG
AATAATCAGATGTAATGAATTATAATGTCTGTGATTAACAAAGCTACACGTTCAGTGAGCGGCAGGATGAATAGCCAAGCTTAGTTCGAT
ACACTTTTGCCCTCAGCTGTGCAAATGGATTGCATTGTACTTTTAAATGTGGCATGCTGAATGGGAGCAGGGGACATGGCTTTTTATTCT
GGAAGATAGAAACTACTCTTCTGGTAACAAAGAATTTGATTCGGAGTTAACTAAAAGGTTCATTTAACAAGCTGCCTCTTACTAATCGGA
TCAGGAAGATAATGTGACTTTAGAGCTTATGATGTTTTCCCCCCGTTTTTGTTTTTTGTTTTGTAGTTGATATTCACTGATGGACTCCAA
AGAATCATTAACTCCTGGTAGAGAAGAAAACCCCAGCAGTGTGCTTGCTCAGGA A/G AGGGGAGATGTGATGGACTTCTATAAAACCC
TAAGAGGAGGAGCTACTGTGAAGGTTTCTGCGTCTTCACCCTCACTGGCTGTCGCTTCTCAATCAGACTCCAAGCAGCGAAGACTTTTGG
TTGATTTTCCAAAAGGCTCAGTAAGCAATGCGCAGCAGCCAGATCTGTCCAAAGCAGTTTCACTCTCAATGGGACTGTATATGGGAGAGA
CAGAAACAAAAGTGATGGGAAATGACCTGGGATTCCCACAGCAGGGCCAAATCAGCCTTTCCTCGGGGGAAACAGACTTAAAGCTTTTGG
AAGAAAGCATTGCAAACCTCAATAGGTCGACCAGTGTTCCAGAGAACCCCAAGAGTTCAGCATCCACTGCTGTGTCTGCTGCCCCCACAG
AGAAGGAGTTTCCAAAAACTCACTCTGATGTATCTTCAGAACAGCAACATTTGAAGGGCCAGACTGGCACCAACGGTGGCAATGTGAAAT
TGTATACCACAGACCAAAG-3'