SNPJam Report for METAP2

Showing coding SNPs for METAP2 (Gene ID: 10988)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 12385818 Link_out

Alleles: A/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
12 95868067

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_006838 Link_out NP_006829 Link_out 1 K [Lys] / E [Glu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCAGCTTCCGGCGTGGCTGGTGTAGGCGGGTGGAGAAGGATCGGGGCCCTCGCCGCTCTGTCTCATTCCCTCGCGCTCTCTCGGGCA
ACATGGCGGGTGTGGAGGAGGTAGCGGCCTCCGGGAGCCACCTGAATGGCGACCTGGATCCAGACGACAGGGAAGAAGGAGCTGCCTCTA
CGGCTGAGGAAGCAGCCAAGAAA A/G AAAGACGAAAGAAGAAGAAGAGCAAAGGGCCTTCTGCAGGTAAAGAGAGTTTTATGTTTTCC
CAGTCCCCTCCGGGAACGGCTGAACTGTTTGGCTCAGGCCCGTTGAGGGGGCCGGGACCGGGGCCCCAGAGCCCCGACTAGACTGATTCT
TGGGCCTGACAGGGTGGCAAAGCCGGGCTATAGATTCCTAGTCTGAGA-3'

[Top]

RS ID: 3794261 Link_out

Alleles: G/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
12 95906603

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_006838 Link_out NP_006829 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTCTACATTCATGAATATACTATTTTGTATGTATGCCACATTTTTTAGAAATGCTGTTAACTCAGAAGAGATGCTAATTAGCCACAT
AAAATCAATCGTCTCGTCTCTCACCTTATTGGCACATGTCCAACATCAAAATTTTTCATGTAATGTGAACATTCCATATCATCATGAACA
ACACCTTTTCCTGTACTACCAAA G/T GTTTCAATTGCATATACTTCTCCTTCCTGAAAAATAAATAAGGGTCAAGGGGAGAGAAAGAA
GAAAAATTCAGAACGAATCACAATTACCATCTCTCTTTCTCTCTCTCTCTTTTTGAGACAGAGTCTCTCTCTGCTGCCAGGCTGGAGTGC
AGTGGTGAGATCTTGGCTCACTGCAACCTCCACTTTCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGGTGGGACTACAGGC
ACGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGATACAAGGTTCCACCATGTTGGCCAGGATGGTCTCAAACTCCTGACCTCA
CTCAGGTGATCTGCCTGCCTTGGTGTCTCAAAGTGCTGGGATTAACAGGCCTGAGCTACCGAGCCTGGCCTACAATTACCATCTCTTGAA
GTCTCTACCTGATTAAGCAGCAACATGAAATAGCCCCTGGCGGTCCTTATCTAGCCTTGCCCTGCTTTATCTCCTTAG-3'

[Top]

RS ID: 2305293 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
12 95879734

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_006838 Link_out NP_006829 Link_out 3 C [Cys] / C [Cys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TTTCAAGAGAGGTGAAAAACAAATTTGTTTAAGTTAACCTTTATCTACAAGAATTTTTATTTTGTGATCCTCAGTTTAATATACTTT
TTAAATGACCAATAACCTGCTATTGGTCCCAATCATTTTGGATAAGAGGGCTTCTACTGTATCTTCTTTATGACAAATTTATAAGCATTT
ATTAAAGTAGTGGAGCAAAGTTCTGAGAAATGTCAAATCTGCTTTATTGCTAAGCTATAACTGTCAGAAATTAAACTGGAAGTGATTTGA
TGATCCTTACCCATCTTGTGTGGGTGGGTATTC A/G CATTCTTGTCCTTTGGGAAATACACCATTAGGATACAGGTCACATATTGGAA
CTGAGGGAGGGTCTGTTTGAACTTTTGCTGTGAGATACAAATAAAGCATTAACTTCTGTAGTTAAAAATAAAATTAAGCAGTTATTAGAG
TTTTCTCAGTTCCTAATGGTTGTTATATGTTCTGATTTTAAGGAAACTCCTTGCTGCCACAGTTAAAAGCAGAAGACACTTCATCATGCT
GGCCACCTCCTCAATGATTTATTGCTGCTTGGGAAAAAGAAATTTTTAACTCCTCAGAACTCCATTAT-3'

[Top]

RS ID: 1802823 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
12 95905749

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_006838 Link_out NP_006829 Link_out 2 K [Lys] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCTGGAAAAACAGTGCCGATTGTGA A/G AGGAGGGGAGGCAACAAGAATGGAG-3'