SNPJam Report for MAP2

Showing coding SNPs for MAP2 (Gene ID: 4133)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 6749066 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By 2 hit 2 allele
  • By cluster

Details:

Chromosome Reference Position
2 210557430

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable
missense NM_002374 Link_out NP_002365 Link_out 2 E [Glu] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGTTCCATAATTTTTGTTTTTATTCTACCATTCATTTATCACTTCAAAATATAATTTTAAGCTTATTTCCTGAACGCACTTGCCTAT
TATTTGTTTAAAAATCAACCCGATTACTTCAGATTTACTTACAGCCTCGAAGATGGAGTTCCACGATCAACAGGAATTGACTCCCTCTAC
AGCTGAGCCTTCAGACCAGAAGG A/G AAAGGAGTCAGAGAAGCAAAGTAAGCCTGGTGAAGACCTTAAACATGCTGCCTTAGTTTCTC
AGCCAGAGACAACTAAAACTTACCCTGATAAAAAGGACATGCAAGGCACGGAAGAAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTC
TTGTTGCCAGCCTGGAAGACATGAAACAGAAGACAGAACCAAGCCTTG-3'

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RS ID: 6720659 Link_out

Alleles: C/T

Validation:

  • By cluster
  • By frequency
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
2 210557380

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002374 Link_out NP_002365 Link_out 3 H [His] / H [His]
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATTAGCTTATAACTTTTATGTATAGAAGGCACATGAATTTGTTTCTTCTGTAATACACATCACATAATGTTTAGGAGAGACCAAAAA
AAAAAAAAACAAAGAAAAAAAGAGAAAAGAATATCCAGAAATATACTGTTCTTACAATTCCTTTGCACATTAATTTACAACCAGAGTTCA
TTTTAGTAATAGTACACATATATCTCAGTCCTGACCTTTTCATATTGACTTTTACATGGGTAGCATGCTTGCATGTTCCATAATTTTTGT
TTTTATTCTACCATTCATTTATCACTTCAAAATATAATTTTAAGCTTATTTCCTGAACGCACTTGCCTATTATTTGTTTAAAAATCAACC
CGATTACTTCAGATTTACTTACAGCCTCGAAGATGGAGTTCCA C/T GATCAACAGGAATTGACTCCCTCTACAGCTGAGCCTTCAGAC
CAGAAGGAAAAGGAGTCAGAGAAGCAAAGTAAGCCTGGTGAAGACCTTAAACATGCTGCCTTAGTTTCTCAGCCAGAGACAACTAAAACT
TACCCTGATAAAAAGGACATGCAAGGCACGGAAGAAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTCTTGTTGCCAGCCTGGAAGAC
ATGAAACAGAAGACAGAACCAAGCCTTGTAGTACCTGGCATTGACCTCCCTAAAGAGCCTCCAACTCCAAAAGAACAAAAGGACTGGTTC
ATCGAAATGCCAACGGAAGCAAAAAAGGATGAGTGGGGTTTAGTTGCCCCCATATCTCCTGGCCCTCTGACTCCCATGAGGGAAAAAG-3
'

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RS ID: 5838179 Link_out

Alleles: -/C

Validation:

Not Completed

Details:

Chromosome Reference Position
2 210558443

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_002374 Link_out NP_002365 Link_out 1 Not Applicable
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ACCCTCAGAGGCAATGACCTTACCCAAAGATGCTCACATTCCAGTTGTAGAAGAACATGTTATGGGGAAAGTTTTAGAGGAAGAAAA
GGAGGCCATAAATCAAGAGACTGTGCAGCAAAGGGATACTTTCACCCCCAGTGGACAGGAACCTATACTTACTGAAAAGGAAACTGAGCT
GAAGCTTGAAGAAAAAACCACCATTTCTGACAAAGAAGCTGTGCCAAAAGAGAGTAAACCCCCAAAACCTGCAGATGAAGAAATAGGCAT
AATTCAGACCTCCACAGAGCACACTTTCTCAGAACAGAAAGACCAAGAGCCTACCACAGATATGTTGAAACAGGACTCGTTCCCTGTAAG
TTTGGAGCAAGCAGTTACAGATTCAGCCATGACCTCTAAAACA -/C TGGAGAAAGCCATGACCGAACCATCTGCATTAATTGAAAAGA
GCTCAATTCAGGAACTTTTTGAAATGAGAGTTGATGACAAAGATAAGATTGAAGGAGTTGGAGCTGCAACATCAGCTGAGCTTGATATGC
CATTTTATGAAGATAAATCAGGAATGTCCAAGTACTTTGAAACATCTGCCTTGAAAGAAGAAGCAACAAAAAGCATTGAGCCAGGCAGTG
ATTACTATGAACTGAGTGACACTAGAGAAAGTGTCCATGAGTCTATTGATACCATGTCTCCCATGCATAAAAATGGTGACAAGGAGTTTC
AAACAGGAAAAGAATCCCAGCCCAGTCCTCCAGCACAAGAAGCAGGGTACAGCACTCTCGCACAGAGTTATCCATCAGATTTACCTGA-3
'

[Top]

RS ID: 2271252 Link_out

Alleles: A/G

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele

Details:

Chromosome Reference Position
2 210517915

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002374 Link_out NP_002365 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_031845 Link_out NP_114033 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_001039538 Link_out NP_001034627 Link_out 3 D [Asp] / D [Asp]
coding-synonymous NM_031847 Link_out NP_114035 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GACTAAACTGACTTCAAAGCACAAAGCAAGCACTTGGTGACAGTAGAGCCCTTAGTTACCTGCTGTTTCTCTGTCAGCTGAGGTCAG
CTCTCCGTTGATCCCATTCTCTTTGGTATTTGAATAGGTGCCCTGTGACCCATGCTCTCCAAAGGCACCCTCTTCATCCTCCCTGTATGG
GAATCCATTGGCGCTTCGGACAAGTCCTTCCCCTGCTCCGCCTTGATCCTTAATCTCAGGTGGATGTGAGTGTGCAGATGCCTCTGTTAG
CGGTGCTGAGGTCCAGTGAGGTGCCTTTGCTTC A/G TCTTTCCGTTCATCTGCCATTCTTCAATGCCTTGTTATTTCTCCTGCAACTG
AAAGAGAAAAAATAGTAGCTATTACTTTGGGGAAATCTTCTGATCTGATATTGGTTGTACCAAGATAGGAAAAATTTATAGCAAACCGTG
TGGCTTTCTATGGTCAAAGAAAACATGTACAATAACCTATGTTTAATATCAAGAATGGGTCAATTAGTTCATCTTGAGTTTTACAGACCA
TTTCTGGAATATTAGTTCTTTTAAAATAAGATCAATGTCATTCTACACATATTCCTTTTTGTAAACAA-3'

[Top]

RS ID: 2271251 Link_out

Alleles: C/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
2 210518139

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002374 Link_out NP_002365 Link_out 2 A [Ala] / G [Gly]
missense NM_031845 Link_out NP_114033 Link_out 2 A [Ala] / G [Gly]
missense NM_001039538 Link_out NP_001034627 Link_out 2 A [Ala] / G [Gly]
missense NM_031847 Link_out NP_114035 Link_out 2 A [Ala] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AAGCACAAAGCAAGCACTTGGTGACAGTAGAGCCCTTAGTTACCTGCTGTTTCTCTGTCA C/G CTGAGGTCAGCTCTCCGTTGAT
CCCATTCTCTTTGGTATTTGAATAGGTGCCCTGTGACC-3'

[Top]

RS ID: 2239672 Link_out

Alleles: G/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
2 210559960

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002374 Link_out NP_002365 Link_out 3 V [Val] / V [Val]
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCTAATGATAGGTTGGATACTGTACTAGAAAAGAGTGAAGAACATGCTGATTCAAAAGAACATGCCAAGAAAACTGAAGAGGCTGGT
GATGAAATAGAAACATTCGGATTAGGAGTAACCTATGAGCAAGCTTTGGCCAAAGATTTGTCAATACCAACAGATGCATCCTCTGAGAAA
GCAGAGAAGGGTCTTAGTTCAGT G/T CCAGAGATAGCTGAGGTAGAACCATCCAAAAAGGTGGAACAAGGTCTGGATTTTGCTGTCCA
GGGTCAACTAGATGTTAAAATTAGTGACTTTGGACAGATGGCTTCAGGGCTAAACATAGATGATAGAAGGGCAACAGAGCTAAAACTTGA
GGCTACACAGGACATGACCCCCTCATCCAAAGCACCGCAGGAGGCAGA-3'

[Top]

RS ID: 755708 Link_out

Alleles: A/C

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
2 210558113

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable
missense NM_002374 Link_out NP_002365 Link_out 1 V [Val] / F [Phe]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTGATGTTGCAGCTCCAACTCCTTCAATCTTATCTTTGTCATCAACTCTCATTTCAAAAAGTTCCTGAATTGAGCTCTTTTCAATTA
ATGCAGATGGTTCGGTCATGGCTTTCTCCAGTGTTTTAGAGGTCATGGCTGAATCTGTAACTGCTTGCTCCAAACTTACAGGGAACGAGT
CCTGTTTCAACATATCTGTGGTAGGCTCTTGGTCTTTCTGTTCTGAGAAAGTGTGCTCTGTGGAGGTCTGAATTATGCCTATTTCTTCAT
CTGCAGGTTTTGGGGGTTTACTCTCTTTTGGCACAGCTTCTTTGTCAGAAATGGTGGTTTTTTCTTCAAGCTTCAGCTCAGTTTCCTTTT
CAGTAAGTATAGGTTCCTGTCCACTGGGGGTGAAAGTATCCCTTTGCTGCACAGTCTCTTGATTTATGGCCTCCTTTTCTTCCTCTAAAA
 A/C TTTCCCCATAACATGTTCTTCTACAACTGGAATGTGAGCATCTTTGGGTAAGGTCATTGCCTCTGAGGGTGGTGCTTCTGCCATT
TTGTCAGGTTTAGCCTCATGGGGCTCTTCAATTTTAAAACTATCTTTGGCAGTAGCTGGGCCACTGGTTTGTTGCAGAGATATTTTGTCA
TCTGGCTGTAAAAAGGCAGGGGCAAAGGGCGATGTTTTTGTACTATTTCATTCTTCATGACATCTAAAGGAAAAGTGAAGCTTCCCCCTT
TGGAAGGGGACTTGCATGGGAGAATCAAACTGTTCTCCCTTTCCATTTTGGGATATCATAAAAACATCTTTTTCCTCATGGGAGTCAGAA
GGCCAGGAAAATTGGGGGCAACTAAACCCCCTCAACCTTTTTTGCTTCCCGTTGGCAT-3'

[Top]

RS ID: 741007 Link_out

Alleles: A/G

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
2 210557542

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002374 Link_out NP_002365 Link_out 3 T [Thr] / T [Thr]
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGAGCCTTCAGACCAGAAGGAAAAGGAGTCAGAGAAGCAAAGTAAGCCTGGTGAAGACCTTAAACATGCTGCCTTAGTTTCTCAGCC
AGAGACAACTAAAACTTACCCTGATAAAAAGGACATGCAAGGCAC A/G GAAGAAGAAAAAGCACCCCTAGCTTTGTTTGGGCACACTC
TTGTTGCCAGCCTGGAAGACATGAAACAGAAGACAGAACCAAGCCTTGTAGTACCTGGCATTGACCTCCCTAAAGAGCCTCCAACTCCAA
AAGAACAAAAGGACTGGTTCATCGAAATGCCAACGGAAGCAAAAAAGGATGAGTGGGGTTTAGTTGCCCCCATATCTCCTGGCCCTCTGA
CTCCCATGAGGGAAAAAGATGTATTTGATGATATCCCAAAATGGGAAGGGAAACAGTTTGATTCTCCCATGCCAAGTCCCTTTCAAGGGG
GAAGCTTCACTCTTCCTTTAGATGTCATGAAGAATGAAATAGTTACAGAAACATCGCCCTTTGCCCCTGCCTTTTTACAGCCAGATGACA
AAAAATCTCTGCAACAAACCAGTGGCCCAGCTACTGCCAAAGATAGTTTTAAAATTGAAGAGCCCCATGAGGCTAAACCTGACAAAATGG
CAGAAGCACCACCCTCAGAGGCAATGACCTTACCCAAAGATGCTCACATTCCAGGTGTAGAAGAACATGTTATGGGGAAAGTTTTAGAGG
AAGAAAAGGAGCCATAATCAAGAGACTGTGCAGCAAAGGGATACTTTCACCCCCAGTGGACAGGAACCTATACTTACTGAAAAGAAACTG
AGCTGAAGCTTGAAGAAAAAACCACA-3'

[Top]

RS ID: 741006 Link_out

Alleles: C/T

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele

Details:

Chromosome Reference Position
2 210558162

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
intron NM_031845 Link_out Not Applicable Not Applicable Not Applicable
intron NM_001039538 Link_out Not Applicable Not Applicable Not Applicable
intron NM_031847 Link_out Not Applicable Not Applicable Not Applicable
missense NM_002374 Link_out NP_002365 Link_out 2 R [Arg] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTGATGTTGCAGCTCCAACTCCTTCAATCTTATCTTTGTCATCAACTCTCATTTCAAAAAGTTCCTGAATTGAGCTCTTTTCAATTA
ATGCAGATGGTTCGGTCATGGCTTTCTCCAGTGTTTTAGAGGTCATGGCTGAATCTGTAACTGCTTGCTCCAAACTTACAGGGAACGAGT
CCTGTTTCAACATATCTGTGGTAGGCTCTTGGTCTTTCTGTTCTGAGAAAGTGTGCTCTGTGGAGGTCTGAATTATGCCTATTTCTTCAT
CTGCAGGTTTTGGGGGTTTACTCTCTTTTGGCACAGCTTCTTTGTCAGAAATGGTGGTTTTTTCTTCAAGCTTCAGCTCAGTTTCCTTTT
CAGTAAGTATAGGTTCCTGTCCACTGGGGGTGAAAGTATCC C/T TTTGCTGCACAGTCTCTTGATTTATGGCCTCCTTTTCTTCCTCT
AAAACTTTCCCCATAACATGTTCTTCTACAACTGGAATGTGAGCATCTTTGGGTAAGGTCATTGCCTCTGAGGGTGGTGCTTCTGCCATT
TTGTCAGGTTTAGCCTCATGGGGCTCTTCAATTTTAAAACTATCTTTGGCAGTAGCTGGGCCACTGGTTTGTTGCAGAGATATTTTGTCA
TCTGGCTGTAAAAAGGCAGGGGCAAAGGGCGATGTTTTTGTACTATTTCATTCTTCATGACATCTAAAGGAAAAGTGAAGCTTCCCCCTT
TGGAAGGGGACTTGCATGGGAGAATCAAACTGTTCTCCCTTTCCATTTTGGGATATCATAAAAACATCTTTTTCCTCATGGGAGTCAGAA
GGCCAGGAAAATTGGGGGCAACTAAACCCCCTCAACCTTTTTTGCTTCCCGTTGGCAT-3'