SNPJam Report for GRIK5

Showing coding SNPs for GRIK5 (Gene ID: 2901)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 117272722 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42558520

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002088 Link_out NP_002079 Link_out 3 S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGATAGGCAGCAACAGCCAGGAGTGGACAGGGGAGGCAGTGGGTACGGTGGGAAGAGCAGGGAGGGCAGAGGGCCACAGGGTGGTCA
CAGTGAGCGCTCCCACCTGAGGTGGCCGTGTCCTGCCTCCTCCACCCATCCCCGCTCGGGCTCACCATGCGCAGGTAGTTCATGAGGCTG
GTCCCGTGGGGCCAAATGTTGGC C/T GATGTACAGGCCAGAGGCTTCACACCGATCTCCTGGCTGCGGTTCAGCTCTCGGACAGCGCT
CACCACCACGTGCACGGCGTCAAACATCAGGGCGGCTGACAGCTGCGGTGGGACAGAGGCGGGGGTGGGATGGATAAGAGGCTGCCTAGG
CAGAGGAGCCCCAAAGGCCCCTGAGCTGCCACCCTCAAACCCTCAAAT-3'

[Top]

RS ID: 116829487 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42563606

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002088 Link_out NP_002079 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TTTGACTCCTGAGGCCCATGGGCATTGGGTGACTTGCTCGGTCACCCCAAGTTTCTGGCCCCAGTCCTTTGGGAAATCAGAGGTAGG
GGCCTCACCTTACGGAGGATGAGGTGGGAGATGGAGGCGTTGGCGTCGATGATGATGGTGGACACCTTGTCATCACGGATCTCCTTGAGC
AGTGGTGTGGGGTCCCGGCTGTC A/G TCCAACATCCTCACTGACAGCGTCTCCTTGGAGATGAGGAAGCCACGCACCAGTTCCTCCAA
TCGCAGCAGGCCTGAGGGAGGGGTGGGGCCTTGGGTTGGAGCCCTTCTGGGTACCCAGGCATGGCGTAGACACTCTCTCCTCCTCAACAT
GGGGCAGCTGGGCAGAGGACTGGAGGGTGTGCAAGGACATGGGGCAGC-3'

[Top]

RS ID: 112966720 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42525599

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002088 Link_out NP_002079 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCTCAGATGGGTCCCTCCCTCGCCCCGGGCAGAGGCAGATAGAAAGCTTCTCACCAGACTCCGCTGACACAGCGCGTGGACAGCGCC
CGGGGCATGATCTCCGAGCCCTGCTGCATGAAGCCCCCCACGGGAAACCACAGGCTGTTGCCCAGCGTGTACTGGTTCTCCAGGATGTGG
GGGCGTGCCCGCAGGCATGGGTG C/T GGGTTATACCACTCATAGGGGCTCAGCCTGTGGAGAGACGTGCAGCGTGTGGATGGGGCCCA
GAGCCCAGGTGGGGAGGAAAAGGAAAGAAGCAAAGGAAAGTCACAGTGATCAGAAGAAAGGGGGAGAGATGGAAAAAGGAGCAAGATGGA
CAGAAGCACACAGAGAAAAGGCAGAGAGAGATGCACAGAGATGGAGAC-3'

[Top]

RS ID: 112088850 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42526118

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002088 Link_out NP_002079 Link_out 1 V [Val] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCACAAGGGGAAGAATGAGACTCAGACACAGGGCACAAAACTGAGAAAGGAGGGCACAGGGAATCCGAGGCCCCAAAGGGGAGGCCA
AGGACAGTTCCGAGAGAGAAGAGGCAGGTCGGTCCCAGAGGCCTCGGCTCGTGCCTCCTCCAGCCCCTTCCTTCCCAGTAGGCAGTGGAC
TCACCTGGCAGCCAGAAACAGGA C/T GCAGCTGACAGCCAGGTAGGCAAGAAGCATGAAGAGCCACACAGCAGGGGAGAAGGGGTCCA
GGAAGGAGAAGTAGCCAGGCTTGCGGCCCTGTGGGGAGAGGGAGTGAGACCCGGAGACACCCCTGGCCTGAGCCTCACACCCAGCCCCTG
CCCTACCAGGGACCTGGGAGCCTGACCGGCCCATCTGAGGTCCTGGGG-3'

[Top]

RS ID: 78522977 Link_out

Alleles: G/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
19 42525543

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002088 Link_out NP_002079 Link_out 2 N [Asn] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGGAAAACGGGGAATCAAATCTTCCAGGAGATGCCACAGCCCCAACCCCATCCAGGCCTCAGATGGGTCCCTCCCTCGCCCCGGGCA
GAGGCAGATAGAAAGCTTCTCACCAGACTCCGCTGACACAGCGCGTGGACAGCGCCCGGGGCATGATCTCCGAGCCCTGCTGCATGAAGC
CCCCCACGGGAAACCACAGGCTG G/T TGCCCAGCGTGTACTGGTTCTCCAGGATGTGGGGGCGTGCCCGCAGGCATGGGTGTGGGTTA
TACCACTCATAGGGGCTCAGCCTGTGGAGAGACGTGCAGCGTGTGGATGGGGCCCAGAGCCCAGGTGGGGAGGAAAAGGAAAGAAGCAAA
GGAAAGTCACAGTGATCAGAAGAAAGGGGGAGAGATGGAAAAAGGAGC-3'

[Top]

RS ID: 75155857 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42561104

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_002088 Link_out NP_002079 Link_out 3 A [Ala] / A [Ala]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTTGAACATGGAGAAGCCCAGGATGTTGGAGGAGTCCTCCACAATACCGTCCAGATGCAGGATGGGGAAGTCCTGGGACCAGGAAGA
GGTGGTGAGGCCTGGGGCTAAGCCCTAATGGGACAGCTGTGATGGGAAGGAAGTGGGGGCAGAGATGGGCCAGAGGGCATACACACCATG
GTGGTGAGGATGTACTTGTAAAA C/T GCTGAGGTCATTCCCAGTTCCGAGGCCTGGAAAACACAGGAGGCAAAGAGGCAGAGTGAGAG
ACAGAGACCCACAGGCAGAGATGGGGAGGACTCAAGAGAAGAAGAGAGATTTAGAGACAGCCCTGGTGAGAAGACACTCCATGGGAAACA
CAGTAAAGTAATAAATGCTCAGAGATAGACAGACAGGGAGGAGGAGAC-3'

[Top]

RS ID: 61741187 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42560815

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_002088 Link_out NP_002079 Link_out 2 A [Ala] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTATCTGTGCAGAGTGTTTCTGGGTGTGACTGGGTATCTGTGTGCTCACC A/G CAGGGCCCAGGTAGGTGCTGGCTTCACAGTTC
TCCCTCCAGGACATGTTG-3'

[Top]

RS ID: 35109445 Link_out

Alleles: -/C

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42507598

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_002088 Link_out NP_002079 Link_out 2 G [Gly] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTTCTTCCTCACGCGCTGATTCTCTGGCCCCATCAGCTCTCTTACTTCCCCACCTCCTGCATTCCTCTGCCCCCTTCTCGCGATCCC
CACCACCCTCCAGGTATGGCTCCCAATGCCACAATCTTCACGCACCTCAGCCCCTGGGGGTCCCTGTTCCTGCCCACCCCCACCCCCAGC
CTCCTCACCTCCTCGGACTCAGCTGACCTCCGTGTGGACCATATGAATTCCATGACCGCCACGAAGACAGCAATGATGAGGCCACAGATG
AGCACGATAAAAATGCCACCAATGTTCTCCATG -/C CCCAAACCTGGAGGGCGAAGGGAGTTGGGGGGCAAAGGGAGTTGGGGCTGTG
TGGGAAGGGGGCTGGGAGGGGGCTATGGGAAGGGGACACCATACGCGGGAACTGACCTTTAGCTCGATGGTCCTCCTCCTTGGGGCACCG
GCCCCCCTCCCACCACTTGCGCTTCAGGATCTCCAGCCGGTTGTTCTCCTGAAGCTGCAGGATGGCCAGTGTGATCTCATCCCGGAACGG
GGAGCCTGGGCAGGCACACGAGGGGCTGGACCAGCCATCGGGCCCTGCAGCCCTGACCGCCCCAAACC-3'

[Top]

RS ID: 12609687 Link_out

Alleles: G/T

Validation:

  • By hap map
  • By cluster

Details:

Chromosome Reference Position
19 42566669

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
stop-gain NM_002088 Link_out NP_002079 Link_out 2 S [Ser] / X

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAAGGGGTCTGTAGAACCAGAGGCCTCGGTTTCTGAAGATGGGAGAAGAGCCTGGTGCCTGGGTGCCCCAGGGTTCTAACTAGGGGG
CAGTGAACCACTGTGTGGGACACCAGATCTCTTGGGAAGGGGTGTCTGGGGGAACAGAAAACAAAACATTCAGTTCTCCCTCACACTCAG
CCTTGGCGCAGATGAGGCTGGCC G/T AGGGGTAGTTGAAGGACTTGAGGATTCGGGAGACCGCCAAGCTGACGTCCTCGTTACTGGGG
TACAGGCTGACAGACGCGAAGCGAAGGTACTGAAGGCGGGGTGTCTCCTCGGGACCCACCTTGATGTGGGGGATCTGGACAGAGAGGAAA
CTTTGGCCTCCATCCTGCTTCTCCGCCCAGCCCTCGCCTCCCAGGGAC-3'

[Top]

RS ID: 1143143 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 42510088

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
stop-gain NM_002088 Link_out NP_002079 Link_out 1 Q [Gln] / X

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCACCATCCACGCCGGCTCCACCATGACCTTCTTCCAGAATTCACGGTAC C/T AAACGTACCAGCGCATGTGGAACTACATGCAG
TCGAAGCAGCCCAGCGTG-3'