SNPJam Report for GPRC5A

Showing coding SNPs for GPRC5A (Gene ID: 9052)

Show all SNPs for this gene at dbSNP

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This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 76634522 Link_out

Alleles: C/T

Validation:

  • By frequency

Details:

Chromosome Reference Position
12 13061553

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003979 Link_out NP_003970 Link_out 1 R [Arg] / W [Trp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGGACTCCAACAGGCGAAAAATGCTGCCTACTCAGTTTCTCTTCCTCCTGGGTGTGTTGGGCATCTTTGGCCTCACCTTCGCCTTCA
TCATCGGACTGGACGGGAGCACAGGGCCCACACGCTTCTTCCTCTTTGGGATCCTCTTTTCCATCTGCTTCTCCTGCCTGCTGGCTCATG
CTGTCAGTCTGACCAAGCTCGTC C/T GGGGGAGGAAGCCCCTTTCCCTGTTGGTGATTCTGGGTCTGGCCGTGGGCTTCAGCCTAGTC
CAGGATGTTATCGCTATTGAATATATTGTCCTGACCATGAATAGGACCAACGTCAATGTCTTTTCTGAGCTTTCCGCTCCTCGTCGCAAT
GAAGACTTTGTCCTCCTGCTCACCTACGTCCTCTTCTTGATGGCGCTG-3'

[Top]

RS ID: 35854766 Link_out

Alleles: -/A

Validation:

Not Completed

Details:

Chromosome Reference Position
12 13065040

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_003979 Link_out NP_003970 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TTTTGAAGTGGTCCTAGGATGAGGTGGGGCTCTGGTGAAGTTCTGAAAAGGGGCGTCCCTAGTCATCATAGTTATTCATTCATTCAA
CCAATATTGTGTTTGCTTTGTGCCTGGTCCTAGGCTTGAGGACCTAGTCTCTGTCCCTCCAAGAAACTTAAGGTCTGCTGGAGAGACAGG
CAATTAAATGGGCAAGATGTCACACTGTGATAAGTGATACAATGGGGTGAACATAGGTGGGGGCCCCAGTGGTTTAATTTCTCCTGTTCC
TCCATTTCAGGTTTTGAAGAGACAGGGGACACG -/A CTCTATGCCCCCTATTCCACACATTTTCAGCTGCAGGTAAGTGATTTTTTTC
TCCCTCTTCATCAAAGGCATTAGCACCTCAGGAACACTGATCCTTTGGAAACAGACGATGTTACCTTTCTCATGGCCCCTAGATGGCCAC
TTGAAGGAATGATGGGTCTTCTTTCCTCTAAGCGGCCTCACGGGGTTAGTGGGTAAGAATGAGTGCTTGGCATAGAGAGGACTTGGGGGT
GGGAGGCCTGGGAGAAAGGGAAGGAAATGAGACTTCTGCCCAGACTGGAGACCTGTTGAAATGGCAGG-3'

[Top]

RS ID: 34539622 Link_out

Alleles: -/C

Validation:

Not Completed

Details:

Chromosome Reference Position
12 13061758

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_003979 Link_out NP_003970 Link_out 2 F [Phe] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CACAGGGCCCACACGCTTCTTCCTCTTTGGGATCCTCTTTTCCATCTGCTTCTCCTGCCTGCTGGCTCATGCTGTCAGTCTGACCAA
GCTCGTCCGGGGGAGGAAGCCCCTTTCCCTGTTGGTGATTCTGGGTCTGGCCGTGGGCTTCAGCCTAGTCCAGGATGTTATCGCTATTGA
ATATATTGTCCTGACCATGAATAGGACCAACGTCAATGTCTTTTCTGAGCTTTCCGCTCCTCGTCGCAATGAAGACTTTGTCCTCCTGCT
CACCTACGTCCTCTTCTTGATGGCGCTGACCTT -/C CCTCATGTCCTCCTTCACCTTCTGTGGTTCCTTCACGGGCTGGAAGAGACAT
GGGGCCCACATCTACCTCACGATGCTCCTCTCCATTGCCATCTGGGTGGCCTGGATCACCCTGCTCATGCTTCCTGACTTTGACCGCAGG
TGGGATGACACCATCCTCAGCTCCGCCTTGGCTGCCAATGGCTGGGTGTTCCTGTTGGCTTATGTTAGTCCCGAGTTTTGGCTGCTCACA
AAGCAACGAAACCCCATGGATTATCCTGTTGAGGATGCTTTCTGTAAACCTCAACTCGTGAAGAAGAG-3'

[Top]

RS ID: 34238077 Link_out

Alleles: -/G

Validation:

Not Completed

Details:

Chromosome Reference Position
12 13061901

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_003979 Link_out NP_003970 Link_out 1 C [Cys] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCTTCAGCCTAGTCCAGGATGTTATCGCTATTGAATATATTGTCCTGACCATGAATAGGACCAACGTCAATGTCTTTTCTGAGCTTT
CCGCTCCTCGTCGCAATGAAGACTTTGTCCTCCTGCTCACCTACGTCCTCTTCTTGATGGCGCTGACCTTCCTCATGTCCTCCTTCACCT
TCTGTGGTTCCTTCACGGGCTGGAAGAGACATGGGGCCCACATCTACCTCACGATGCTCCTCTCCATTGCCATCTGGGTGGCCTGGATCA
CCCTGCTCATGCTTCCTGACTTTGACCGCAGGT -/G GGGATGACACCATCCTCAGCTCCGCCTTGGCTGCCAATGGCTGGGTGTTCCT
GTTGGCTTATGTTAGTCCCGAGTTTTGGCTGCTCACAAAGCAACGAAACCCCATGGATTATCCTGTTGAGGATGCTTTCTGTAAACCTCA
ACTCGTGAAGAAGAGCTATGGTGTGGAGAACAGAGCCTACTCTCAAGAGGAAATCACTCAAGGTACAGATGCAGCCTGGCTAGGCAGAGA
ATCCCTTGTAGAAAGGTGGGGGAGAATCATAGGATATTATAACTGTAAGGAACATGCAAGATTTTCCA-3'

[Top]

RS ID: 12368599 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By hap map
  • By cluster

Details:

Chromosome Reference Position
12 13061727

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003979 Link_out NP_003970 Link_out 1 T [Thr] / A [Ala]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATGCTGTCAGTCTGACCAAGCTCGTCCGGGGGAGGAAGCCCCTTTCCCTGTTGGTGATTCTGGGTCTGGCCGTGGGCTTCAGCCTAG
TCCAGGATGTTATCGCTATTGAATATATTGTCCTGACCATGAATAGGACCAACGTCAATGTCTTTTCTGAGCTTTCCGCTCCTCGTCGCA
ATGAAGACTTTGTCCTCCTGCTC A/G CCTACGTCCTCTTCTTGATGGCGCTGACCTTCCTCATGTCCTCCTTCACCTTCTGTGGTTCC
TTCACGGGCTGGAAGAGACATGGGGCCCACATCTACCTCACGATGCTCCTCTCCATTGCCATCTGGGTGGCCTGGATCACCCTGCTCATG
CTTCCTGACTTTGACCGCAGGTGGGATGACACCATCCTCAGCTCCGCC-3'

[Top]

RS ID: 12366842 Link_out

Alleles: C/T

Validation:

  • By 2 hit 2 allele
  • By cluster

Details:

Chromosome Reference Position
12 13061453

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_003979 Link_out NP_003970 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCTGAAGCTTGGGGCATCGTCCTAGAAACGGTGGCCACAGCCGGGGTTGTGACCTCGGTGGCCTTCATGCTCACTCTCCCGATCCTC
GTCTGCAAGGTGCAGGACTCCAACAGGCGAAAAATGCTGCCTACTCAGTTTCTCTTCCTCCTGGGTGTGTTGGGCATCTTTGGCCTCACC
TTCGCCTTCATCATCGGACTGGA C/T GGGAGCACAGGGCCCACACGCTTCTTCCTCTTTGGGATCCTCTTTTCCATCTGCTTCTCCTG
CCTGCTGGCTCATGCTGTCAGTCTGACCAAGCTCGTCCGGGGGAGGAAGCCCCTTTCCCTGTTGGTGATTCTGGGTCTGGCCGTGGGCTT
CAGCCTAGTCCAGGATGTTATCGCTATTGAATATATTGTCCTGACCAT-3'

[Top]

RS ID: 11550683 Link_out

Alleles: G/T

Validation:

  • By hap map

Details:

Chromosome Reference Position
12 13061209

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003979 Link_out NP_003970 Link_out 2 C [Cys] / F [Phe]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAACGCCTTGGCACTAGGGTCCAGAATGGCTACAACAGTCCCTGATGGTT G/T CCGCAATGGCCTGAAATCCAAGTACTACAGAC
TTTGTGATAAGGCTGAAG-3'

[Top]

RS ID: 2075288 Link_out

Alleles: A/G

Validation:

  • By cluster
  • By frequency
  • By submitter
  • By 2 hit 2 allele
  • By hap map

Details:

Chromosome Reference Position
12 13061294

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_003979 Link_out NP_003970 Link_out 3 A [Ala] / A [Ala]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGACCCAGAATCACCAACAGGGAAAGGGGCTTCCTCCCCCGGACGAGCTTGGTCAGACTGACAGCATGAGCCAGCAGGCAGGAGAA
GCAGATGGAAAAGAGGATCCCAAAGAGGAAGAAGCGTGTGGGCCCTGTGCTCCCGTCCAGTCCGATGATGAAGGCGAAGGTGAGGCCAAA
GATGCCCAACACACCCAGGAGGAAGAGAAACTGAGTAGGCAGCATTTTTCGCCTGTTGGAGTCCTGCACCTTGCAGACGAGGATCGGGAG
AGTGAGCATGAAGGCCACCGAGGTCACAACCCC A/G GCTGTGGCCACCGTTTCTAGGACGATGCCCCAAGCTTCAGCCTTATCACAAA
GTCTGTAGTACTTGGATTTCAGGCCATTGCGGCAACCATCAGGGACTGTTGTAGCCATTCTGGACCTGCAGAAAAGGAATGTTGGAGTGG
GGAGAAGGTATTGAATCTCCTAACACAGTCCTCAGACACAGAAGACTAAAAAAGGATTAGGAAACCAATTTTGCATGTTTAGCCAGGGTT
TTGACTTTGAGCTTACTACATTAAGTAAAGCTACTAACTTTCCTCTACCTCCTGTAGTAAATTCTAAA-3'

[Top]

RS ID: 1142186 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
12 13062103

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003979 Link_out NP_003970 Link_out 2 Q [Gln] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAAGAGCTATGGTGTGGAGAACAGAGCCTACTCTCAAGAGGAAATCACTC A/G AGGTTTTGAAGAGACAGGGGACACGCTCTATG
CCCCCTATTCCACACATT-3'

[Top]

RS ID: 850932 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By 2 hit 2 allele
  • By cluster

Details:

Chromosome Reference Position
12 13061535

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_003979 Link_out NP_003970 Link_out 1 S [Ser] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GACGTAGGTGAGCAGGAGGACAAAGTCTTCATTGCGACGAGGAGCGGAAAGCTCAGAAAAGACATTGACGTTGGTCCTATTCATGGT
CAGGACAATATATTCAATAGCGATAACATCCTGGACTAGGCTGAAGCCCACGGCCAGACCCAGAATCACCAACAGGGAAAGGGGCTTCCT
CCCCCGGACGAGCTTGGTCAGAC C/T GACAGCATGAGCCAGCAGGCAGGAGAAGCAGATGGAAAAGAGGATCCCAAAGAGGAAGAAGC
GTGTGGGCCCTGTGCTCCCGTCCAGTCCGATGATGAAGGCGAAGGTGAGGCCAAAGATGCCCAACACACCCAGGAGGAAGAGAAACTGAG
TAGGCAGCATTTTTCGCCTGTTGGAGTCCTGCACCTTGCAGACGAGGA-3'