SNPJam Report for GPR44

Showing coding SNPs for GPR44 (Gene ID: 11251)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 117286870 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620796

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004778 Link_out NP_004769 Link_out 1 V [Val] / M [Met]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTTGCACGTGGCATCGCGGTCAGGCCCCGGGTTCAGGAGCAGCACATTGTAGTAGCACATAATGCGCCCGTCCAGCCGCGAGATGGT
GTCCCGGAACACGAAATAGGGCACCGTGTTGAGCACCGCTAGTGCCCAAAGCACCAGGCAGACTTTGTGCGCCGCGGCCACGGTGCGGTG
GTTCTGCGCCCACACCGGCCGCA C/T CACCTGCAGGCAGCGGTCCAGGCTGATGGCGCTGAGCAGGAAGCCGCTGGCGAACATGTTGA
GAAAGAAGATGGAGGAGTGCAGTTTGCAGAAGGTGGTGCCCAGCTCCCACGAGTGGCCCACGGCCAAGAAGTAGGTGAAGAAGGGCAGGG
AAGCAGAGGCCAACAGGTCGGACAGCGCCAGGTGCAGCACCCAGGTGG-3'

[Top]

RS ID: 56067229 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620753

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004778 Link_out NP_004769 Link_out 2 A [Ala] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGCAGCACATTGTAGTAGCACATAATGCGCCCGTCCAGCCGCGAGATGGTGTCCCGGAACACGAAATAGGGCACCGTGTTGAGCACC
GCTAGTGCCCAAAGCACCAGGCAGACTTTGTGC A/G CCGCGGCCACGGTGCGGTGGTTCTGCGCCCACACCGGCCGCACCACCTGCAG
GCAGCGGTCCAGGCTGATGGCGCTGAGCAGGAAGCCGCTGGCGAACATGTTGAGAAAGAAGATGGAGG-3'

[Top]

RS ID: 55941005 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620701

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004778 Link_out NP_004769 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGCCACCTGCCGCGAGTTGCACGTGGCATCGCGGTCAGGCCCCGGGTTCAGGAGCAGCACATTGTAGTAGCACATAATGCGCCCGTC
CAGCCGCGAGATGGTGTCCCGGAACACGAAATA A/G GGCACCGTGTTGAGCACCGCTAGTGCCCAAAGCACCAGGCAGACTTTGTGCG
CCGCGGCCACGGTGCGGTGGTTCTGCGCCCACACCGGCCGCACCACCTGCAGGCAGCGGTCCAGGCTG-3'

[Top]

RS ID: 55705908 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60621157

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004778 Link_out NP_004769 Link_out 3 I [Ile] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GATGACTCCATTCTCCACCAGGCCCAGCAGCGAGGCCAGCCCGTGCAGCAGCACGGCCGCGTGGTCGATGTAGCGGATGCTGGTGTT
GCTGTGGCTCTGGAGACGGCTCATCTGCTCCAG A/G ATGGGGCAGAGTGGCTTCAGTGTGGCGTTGGCCGACATCGTGGGGCTCTGCA
GTGGAGGGAAGGAGGCGCCTAAGTTGGAAGTGCAGAGGCCACCGGGGAACCAAGAGAGAGGCCCGGAG-3'

[Top]

RS ID: 55642873 Link_out

Alleles: -/GCG

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620166

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_004778 Link_out NP_004769 Link_out 3 R [Arg] / RA

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CGTCTGCGGGGACGCTGCGCAGCTGCCCAGCAGCCAGCCGAGGAGACGCGCGGGGCCCCGCGGTTCCTCCGGGCGGCTGCAGAGAGC
TAAAGGGGAGGCCGAGCGGGCGGTGGAGGAGGT -/GCG GCGGCGGCGGCGGCTGCTTCCCGCGCCACCCAGCTCGCTGTCGTCCACCA
GCACGCTCTCCAGCACCGTGCGCAGCGAGCGCCGCAGCTTGCGCAGCATGTCGGGGCAGGTGAGCACGTA-3'

[Top]

RS ID: 41468051 Link_out

Alleles: -/GCT

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620185

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_004778 Link_out NP_004769 Link_out 3 G [Gly] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CGAGGAGACGCGCGGGGCCCCGCGGTTCCTCCGGGCGGCTGCAGAGAGCTAAAGGGGAGGCCGAGCGGGCGGTGGAGGAGGTGCGGC
GGCGGCGGCTGCT -/GCT CCCGCGCCACCCAGCTCGCTGTCGTCCACCAGCACGCTCTCCAGCACCGTGCGCAGCGAGCGCCGCAGCT
TGCGCAGCATGTCGGGGCAGGTGAGCACGT-3'

[Top]

RS ID: 41459145 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620272

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
stop-gain NM_004778 Link_out NP_004769 Link_out 3 C [Cys] / X

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGCGGCGGCTGCTTCCCGCGCCACCCAGCTCGCTGTCGTCCACCAGCACGCTCTCCAGCACCGTGCGCAGCGAGCGCCGCAGCTTGC
GCAGCATGTCGGG G/T CAGGTGAGCACGTAGAGCACCGGGTTGGCCACGCTGTTGAAGAAGGCCAGGCTGGTGACGAAGGGCAGCCCG
CGCCACACGAGCGGCCGCAGCCCCGGGT-3'

[Top]

RS ID: 41438944 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620104

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004778 Link_out NP_004769 Link_out 3 R [Arg] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGTTCTAACTCGAGGTGCTGCTCAGCGCCCGGTTCAGGGGGCCCGTCTGCGGGGACGCTGCGCAGCTGCCCAGCAGCCAGCCGAGGA
GACGCGCGGGGCC C/T CGCGGTTCCTCCGGGCGGCTGCAGAGAGCTAAAGGGGAGGCCGAGCGGGCGGTGGAGGAGGTGCGGCGGCGG
CGGCTGCTTCCCGCGCCACCCAGCTCGC-3'

[Top]

RS ID: 41352145 Link_out

Alleles: A/C

Validation:

  • By cluster

Details:

Chromosome Reference Position
11 60620692

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004778 Link_out NP_004769 Link_out 3 V [Val] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGCTGCAACCGCAGGCTCACGGCCGCGTGGCTCGAGGCGATGATCGCCAGCGGCACCAGGAAGGCCAGCAGGAACTTGCTGACGGCC
AGGGCCACCTGCCGCGAGTTGCACGTGGCATCGCGGTCAGGCCCCGGGTTCAGGAGCAGCACATTGTAGTAGCACATAATGCGCCCGTCC
AGCCGCGAGATGGTGTCCCGGAA A/C ACGAAATAGGGCACCGTGTTGAGCACCGCTAGTGCCCAAAGCACCAGGCAGACTTTGTGCGC
CGCGGCCACGGTGCGGTGGTTCTGCGCCCACACCGGCCGCACCACCTGCAGGCAGCGGTCCAGGCTGATGGCGCTGAGCAGGAAGCCGCT
GGCGAACATGTTGAGAAAGAAGATGGAGGAGTGCAGTTTGCAGAAGGT-3'

[Top]

RS ID: 34500690 Link_out

Alleles: -/A

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620464

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_004778 Link_out NP_004769 Link_out 2 F [Phe] / F [Phe]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTGCGGCGGCGGCGGCTGCTTCCCGCGCCACCCAGCTCGCTGTCGTCCACCAGCACGCTCTCCAGCACCGTGCGCAGCGAGCGCCGC
AGCTTGCGCAGCATGTCGGGGCAGGTGAGCACGTAGAGCACCGGGTTGGCCACGCTGTTGAAGAAGGCCAGGCTGGTGACGAAGGGCAGC
CCGCGCCACACGAGCGGCCGCAGCCCCGGGTTTGCGTGCGCCCGCGCCTCCAGCAGGCTGAACACGTGGTAGGGCCCCCAGCAGAGCGCG
AAGGCGGCCACGACGGCCGCCACCAGGCGCACG -/A AAGCGGCCTGGCCGCCGGCGGCCGCGGTGCTGCAACCGCAGGCTCACGGCCG
CGTGGCTCGAGGCGATGATCGCCAGCGGCACCAGGAAGGCCAGCAGGAACTTGCTGACGGCCAGGGCCGCCTGGCGCGAGTTGCACGTGG
CATCGCGGTCAGGCCCCGGGTTCAGGAGCAGCACATTGTAGTAGCACATAATGCGCCCGTCCAGCCGCGAGATGGTGTCCCGGAACACGA
AATAGGGCACCGTGTTGAGCACCGCTAGTGCCCAAAGCACCAGGCAGACTTTGTGCGCCGCGGCCACG-3'

[Top]

RS ID: 34191378 Link_out

Alleles: -/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60621110

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_004778 Link_out NP_004769 Link_out 1 R [Arg] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGTCCAGGCTGATGGCGCTGAGCAGGAAGCCGCTGGCGAACATGTTGAGAAAGAAGATGGAGGAGTGCAGTTTGCAGAAGGTGGTGC
CCAGCTCCCACGAGTGGCCCACGGCCAAGAAGTAGGTGAAGAAGGGCAGGGAAGCAGAGGCCAACAGGTCGGACAGCGCCAGGTGCAGCA
CCCAGGTGGTGACCACGGTCTGGCGCATGCGGCAGCCCACCACGAAGAGGATGACTCCATTCTCCACCAGGCCCAGCAGCGAGGCCAGCC
CGTGCAGCAGCACGGCCGCGTGGTCGATGTAGC -/T GGATGCTGGTGTTGCTGTGGCTCTGGAGACGGCTCATCTGCTCCAGGATGGG
GCAGAGTGGCTTCAGTGTGGCGTTGGCCGACATCGTGGGGCTCTGCAGTGGAGGGAAGGAGGCGCCTAAGTTGGAAGTGCAGAGGCCACC
GGGGAACCAAGAGAGAGGCCCGGAGTGGGACCCTGCCCAGGAGATGCCAATGTGACCCACGAATATATTGGGCGGTGGGGGTGGGGGGAA
TAATATCCCAGCATTGCTGTGCTTGGGCAAGTCATTTAACCTTCCCGAGCCTTTTTCTGCCTCTGAAA-3'

[Top]

RS ID: 12807053 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620267

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004778 Link_out NP_004769 Link_out 2 D [Asp] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGCTGCCCAGCAGCCAGCCGAGGAGACGCGCGGGGCCCCGCGGTTCCTCCGGGCGGCTGCAGAGAGCTAAAGGGGAGGCCGAGCGGG
CGGTGGAGGAGGTGCGGCGGCGGCGGCTGCTTCCCGCGCCACCCAGCTCGCTGTCGTCCACCAGCACGCTCTCCAGCACCGTGCGCAGCG
AGCGCCGCAGCTTGCGCAGCATG C/T CGGGGCAGGTGAGCACGTAGAGCACCGGGTTGGCCACGCTGTTGAAGAAGGCCAGGCTGGTG
ACGAAGGGCAGCCCGCGCCACACGAGCGGCCGCAGCCCCGGGTTTGCGTGCGCCCGCGCCTCCAGCAGGCTGAACACGTGGTAGGGCCCC
CAGCAGAGCGCGAAGGCGGCCACGACGGCCGCCACCAGGCGCACGAAG-3'

[Top]

RS ID: 12807051 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 60620265

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004778 Link_out NP_004769 Link_out 1 M [Met] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCAGCTGCCCAGCAGCCAGCCGAGGAGACGCGCGGGGCCCCGCGGTTCCTCCGGGCGGCTGCAGAGAGCTAAAGGGGAGGCCGAGCG
GGCGGTGGAGGAGGTGCGGCGGCGGCGGCTGCTTCCCGCGCCACCCAGCTCGCTGTCGTCCACCAGCACGCTCTCCAGCACCGTGCGCAG
CGAGCGCCGCAGCTTGCGCAGCA G/T GTCGGGGCAGGTGAGCACGTAGAGCACCGGGTTGGCCACGCTGTTGAAGAAGGCCAGGCTGG
TGACGAAGGGCAGCCCGCGCCACACGAGCGGCCGCAGCCCCGGGTTTGCGTGCGCCCGCGCCTCCAGCAGGCTGAACACGTGGTAGGGCC
CCCAGCAGAGCGCGAAGGCGGCCACGACGGCCGCCACCAGGCGCACGA-3'

[Top]

RS ID: 2467642 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
11 60620585

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004778 Link_out NP_004769 Link_out 2 V [Val] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCAAACTGCACTCCTCCATCTTCTTTCTCAACATGTTCGCCAGCGGCTTCCTGCTCAGCGCCATCAGCCTGGACCGCTGCCTGCAGG
TGGTGCGGCCGGTGTGGGCGCAGAACCACCGCACCGTGGCCGCGGCGCACAAAGTCTGCCTGGTGCTTTGGGCACTAGCGGTGCTCAACA
CGGTGCCCTATTTCGTGTTCCGGGACACCATCTCGCGGCTGGACGGGCGCATTATGTGCTACTACAATGTGCTGCTCCTGAACCCGGGGC
CTGACCGCGATGCCACGTGCAACTCGCGCCAGG C/T GGCCCTGGCCGTCAGCAAGTTCCTGCTGGCCTTCCTGGTGCCGCTGGCGATC
ATCGCCTCGAGCCACGCGGCCGTGAGCCTGCGGTTGCAGCACCGCGGCCGCCGGCGGCCAGGCCGCTTCGTGCGCCTGGTGGCGGCCGTC
GTGGCCGCCTTCGCGCTCTGCTGGGGGCCCTACCACGTGTTCAGCCTGCTGGAGGCGCGGGCGCACGCAAACCCGGGGCTGCGGCCGCTC
GTGTGGCGCGGGCTGCCCTTCGTCACCAGCCTGGCCTTCTTCAACAGCGTGGCCAACCCGGTGCTCTA-3'

[Top]

RS ID: 2428461 Link_out

Alleles: C/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
11 60620590

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004778 Link_out NP_004769 Link_out 3 R [Arg] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTTCTGCAAACTGCACTCCTCCATCTTCTTTCTCAACATGTTCGCCAGCGGCTTCCTGCTCAGCGCCATCAGCCTGGACCGCTGCCT
GCAGGTGGTGCGGCCGGTGTGGGCGCAGAACCACCGCACCGTGGCCGCGGCGCACAAAGTCTGCCTGGTGCTTTGGGCACTAGCGGTGCT
CAACACGGTGCCCTATTTCGTGTTCCGGGACACCATCTCGCGGCTGGACGGGCGCATTATGTGCTACTACAATGTGCTGCTCCTGAACCC
GGGGCCTGACCGCGATGCCACGTGCAACTCGCG C/G CAGGCGGCCCTGGCCGTCAGCAAGTTCCTGCTGGCCTTCCTGGTGCCGCTGG
CGATCATCGCCTCGAGCCACGCGGCCGTGAGCCTGCGGTTGCAGCACCGCGGCCGCCGGCGGCCAGGCCGCTTCGTGCGCCTGGTGGCGG
CCGTCGTGGCCGCCTTCGCGCTCTGCTGGGGGCCCTACCACGTGTTCAGCCTGCTGGAGGCGCGGGCGCACGCAAACCCGGGGCTGCGGC
CGCTCGTGTGGCGCGGGCTGCCCTTCGTCACCAGCCTGGCCTTCTTCAACAGCGTGGCCAACCCGGTG-3'