SNPJam Report for GJA1

Showing coding SNPs for GJA1 (Gene ID: 2697)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 72548741 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768449

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 L [Leu] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAAGCAGATTGAGATAAAGAAGTTCAAGTACGGTATTGAAGAGCATGGTAAGGTGAAAATGCGAGGGGGGTTGCT A/G CGAACCT
ACATCATCAGTATCCTCTTCAAGTCTATCTTTGAGGTGGCCTTCTTGCTGATCCAGTGGTACATCTAT-3'

[Top]

RS ID: 72548740 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768260

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTGCTATGACAAGTCTTTCCCAATCTCTCATGTGCGCTTCTGGGTCCTGCAGATCATATTTGTGTCTGTACCCAC A/G CTCTTGT
ACCTGGCTCATGTGTTCTATGTGATGCGAAAGGAAGAGAAACTGAACAAGAAAGAGGAAGAACTCAAG-3'

[Top]

RS ID: 67407538 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768830

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAGCCCTGCCAAAGACTGTGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTC A/G CCTATGT
CTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAA-3'

[Top]

RS ID: 67407537 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768830

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAGCCCTGCCAAAGACTGTGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTC A/G CCTATGT
CTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAA-3'

[Top]

RS ID: 66916793 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768984

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000165 Link_out NP_000156 Link_out 1 H [His] / Y [Tyr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCC C/T ATGCACA
GCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAGCTGCTGGACATGAATTACAGCCAC-3'

[Top]

RS ID: 66916792 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768984

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000165 Link_out NP_000156 Link_out 1 H [His] / Y [Tyr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCC C/T ATGCACA
GCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAGCTGCTGGACATGAATTACAGCCAC-3'

[Top]

RS ID: 57946868 Link_out

Alleles: A/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
6 121768710

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 R [Arg] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGTGGTACATCTATGGATTCAGCTTGAGTGCTGTTTACACTTGCAAAAGAGATCCCTGCCCACATCAGGTGGACTGTTTCCTCTCT
CGCCCCACGGAGAAAACCATCTTCATCATCTTCATGCTGGTGGTGTCCTTGGTGTCCCTGGCCTTGAATATCATTGAACTCTTCTATGTT
TTCTTCAAGGGCGTTAAGGATCG A/G GTTAAGGGAAAGAGCGACCCTTACCATGCGACCAGTGGTGCGCTGAGCCCTGCCAAAGACTG
TGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTCGCCTATGTCTCCTCCTGGGTACAAGCTGGTTAC
TGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAG-3'

[Top]

RS ID: 55796648 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
6 121768761

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TAAGGATYGGGTTAAGGGAAAGAGCGACCCTTACCATGCGACCAGTGGTGCGCTGAGCCC C/T GCCAAAGACTGTGGGTCTCAAA
AATATGCTTATTTCAATGGCTGCTCCTCACCAACYGCT-3'

[Top]

RS ID: 28931601 Link_out

Alleles: A/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
6 121768279

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000165 Link_out NP_000156 Link_out 1 V [Val] / M [Met]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAAGGTTCAAGCCTACTCAACTGCTGGAGGGAAGGTGTGGCTGTCAGTACTTTTCATTTTCCGAATCCTGCTGCTGGGGACAGCGGT
TGAGTCAGCCTGGGGAGATGAGCAGTCTGCCTTTCGTTGTAACACTCAGCAACCTGGTTGTGAAAATGTCTGCTATGACAAGTCTTTCCC
AATCTCTCATGTGCGCTTCTGGGTCCTGCAGATCATATTTGTGTCTGTACCCACACTCTTGTACCTGGCTCAT A/G TGTTCTATGTGA
TGCGAAAGGAAGAGAAACTGAACAAGAAAGAGGAAGAACTCAAGGTTGCCCAAACTGATGGTGTCAATGTGGACATGCACTTGAAGCAGA
TTGAGATAAAGAAGTTCAAGTACGGTATTGAAGAGCATGGTAAGGTGAAAATGCGAGGGGGGTTGCTGCGAACCTACATCATCAGTATCC
TCTTCAAGTCTATCTTTGAGGTGGCCTTCTTGCTGATCCAGTGGTACATCTATGGATT-3'

[Top]

RS ID: 28931600 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121768420

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000165 Link_out NP_000156 Link_out 1 G [Gly] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGGTTGTGAAAATGTCTGCTATGACAAGTCTTTCCCAATCTCTCATGTGCGCTTCTGGGTCCTGCAGATCATATTTGTGTCTGTACC
CACACTCTTGTACCTGGCTCATGTGTTCTATGTGATGCGAAAGGAAGAGAAACTGAACAAGAAAGAGGAAGAACTCAAGGTTGCCCAAAC
TGATGGTGTCAATGTGGACATGCACTTGAAGCAGATTGAGATAAAGAAGTTCAAGTACGGTATTGAAGAGCAT A/G GTAAGGTGAAAA
TGCGAGGGGGGTTGCTGCGAACCTACATCATCAGTATCCTCTTCAAGTCTATCTTTGAGGTGGCCTTCTTGCTGATCCAGTGGTACATCT
ATGGATTCAGCTTGAGTGCTGTTTACACTTGCAAAAGAGATCCCTGCCCACATCAGGTGGACTGTTTCCTCTCTCGCCCCACGGAGAAAA
CCATCTTCATCATCTTCATGCTGGTGGTGTCCTTGGTGTCCCTGGCCTTGAATATCAT-3'

[Top]

RS ID: 17852395 Link_out

Alleles: A/T

Validation:

Not Completed

Details:

Chromosome Reference Position
6 121769025

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000165 Link_out NP_000156 Link_out 3 S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCCCATGCACAGCCTTTTGATTTCCCCGATG
ATAACCAGAATTC A/T AAAAAACTAGCTGCTGGACATGAATTACAGCCACTAGCCATTGTGGACCAGCGACCTTCAAGCAGAGCCAGC
AGTCGTGCCAGCAGCAGACCTCGGCCT-3'

[Top]

RS ID: 17653265 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
6 121768751

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000165 Link_out NP_000156 Link_out 2 A [Ala] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCCCTGGCCTTGAATATCATTGAACTCTTCTATGTTTTCTTCAAGGGCGTTAAGGATCGGGTTAAGGGAAAGAGCGACCCTTACCAT
GCGACCAGTGGTG C/T GCTGAGCCCTGCCAAAGACTGTGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCC
CCTCTCGCCTATGTCTCCTCCTGGGTAC-3'