SNPJam Report for COMP

Showing coding SNPs for COMP (Gene ID: 1311)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

[Top]

RS ID: 75729528 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 18895167

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 1 K [Lys] / E [Glu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CAGCCCAGCCCACCACAGAGGGTGGAGTCCCCACCTGATGTAGCCCACTTGGGGCCGGTGCTGCAGGAACCAACGATAGGACTTCTT
GTCCTTCCAACCCACGTTTCGCGGGTCCTTCCACAGCAGCCGCACCTGGGACTCTGTGTCTCCTGTATGCCACAGAGCGTTCCGCAGCTG
TTCCCCGGGGCCTGTGGAAGACT C/T CACAGCCTGCCAATACCCAGGAAAGGTGGTCAGAGACCTCGTGGGCCACCGGAGCCCCCCTA
GACACCTTCCTGGAGAGACAGTTGGGAGCAGCAGGTGGTGGGCGGCCAGGGGGATCCGGATGAGAGACCCACAAGGAAGCCTTCTTCAGG
GGCCAAATGGCAGCTTGGGGATAGGTCACAGGGGGCAGCAGTGGTCTG-3'

[Top]

RS ID: 71769201 Link_out

Alleles: -/AT

Validation:

Not Completed

Details:

Chromosome Reference Position
19 18893991

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_000095 Link_out NP_000086 Link_out 2 Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CACACACTTTATTTTGTCCTCTCTGAGCCCTTCTCACTTCCCCCTCAGGACGGCCACCCCTTGGGGCTGGGTGCAGAGCCCCCATCC
AGCCGCGGTGAGGGTGGCTGTCATCCGGCGGGTCCTCACCCTGGTCCCTAGGCTTGCCGCAGCTGATGGGTCTCATAGTCCTCTGGGATG
GTGTCTGCAGGGAGAGGGCAGGCGGGTGAGGGCTGAGAAGGCCAGCAGGGCCTGTGTGCAGACTCCCCGCCCACGGCCCGCTGGCCCTCG
GCTCACCATTGCAGCGGTAACGCAGGTTGGCCCAGATGATGTTCTCCTGGGAGAAGCAGAAGACCCCCAGGCGGCCACCCCGCATGGTTG
TGTCCAAGACCACGTTGCTGTCGGCCACCAGCTCAGGGCCCTC -/AT AGAATCGCACCCTGAGGGTCAGACATGGTGAGGCCTGGGGG
ACCTGGGCCAGACCCTTCCCTCTCAGAGCTTCAGTGGCCAGCCCTGGAAGATGGGTACCCCTGACTGGGCTGCACTGGGAGCAAGTGAGG
CCTCTGCCTTGGGCCTCAGTTTCCTGGTGTGGTGGACATCAAGGGCCCTGGACATAGTTGGTGCTAAACAGAGCACCTGGGCTTGCTAGC
AGCATGGAATGGAGGCTGAGAAACAGGGACTGGGTGAGGCCCCATTTCTAGCTGGATACACACTGTGTGCTGTGTCCTGGCCAGGGTCTC
GCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATTACTGCCACCTTAATTCCCAGACTCAACTGACCTCAGCCTCCCTAGTAGCTGG-3
'

[Top]

RS ID: 61752496 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
19 18893732

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 2 Q [Gln] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTCAGAGGCCCGTCCCTACTGTCTCCATGCAGCAAAAACCACAGCCGCCACTCCCTGCACACACACTTTATTTTGTCCTCTCTGAGC
CCTTCTCACTTCCCCCTCAGGACGGCCACCCCTTGGGGCTGGGTGCAGAGCCCCCATCCAGCCGCGGTGAGGGTGGCTGTCATCCGGCGG
GTCCTCACCCTGGTCCCTAGGCT C/T GCCGCAGCTGATGGGTCTCATAGTCCTCTGGGATGGTGTCTGCAGGGAGAGGGCAGGCGGGT
GAGGGCTGAGAAGGCCAGCAGGGCCTGTGTGCAGACTCCCCGCCCACGGCCCGCTGGCCCTCGGCTCACCATTGCAGCGGTAACGCAGGT
TGGCCCAGATGATGTTCTCCTGGGAGAAGCAGAAGACCCCCAGGCGGC-3'

[Top]

RS ID: 61741109 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 18895886

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 3 N [Asn] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCGTCATCCGTGACCGTGTTCACATGGAACGTGCCCTCGAAGTCCACGCC C/T TTGAAGGCAGTGTAACCTAGGGATGGAAAGAG
AGCAGTGGCCTTTCCGAA-3'

[Top]

RS ID: 61739916 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
19 18897440

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 1 N [Asn] / Y [Tyr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TCTCTGGCAGTGTAAAATGCTCTAAGCTGGGCTGTGGGCTGGGTAATCCAACTTGCAGTTCACCCAGAGGGCTTACCCAGCTGGAGT
CTGGCCTGCCCTCACCTGATCCGGGTTGCTCTTCTGGGGACAGTTGTCACAGGCATCCCCTATACCATCGCCATCACTGTCCTTCTGGTC
TGAGTTGGGTACCCTAGGGCAGT C/T GTCGGCCTGGTTGCGGATCCCTGCAGAAATCCACGGGACCAGAGCCCCAAGATTGGGACCAG
GCCAGAATGACTTCATTAGGATGAGCCAGCCTGAGGCTGGCCTGGAACAGAGTCCCAACTTCATGGAAGCTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTGAGACAGTCTCATTGTGTCACTCAGGCTGGAGTGCAGTG-3'

[Top]

RS ID: 55948627 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
19 18899497

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000095 Link_out NP_000086 Link_out 3 Q [Gln] / Q [Gln]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCGTTGCCGGCCCAGCCAACGGCACACTGTGGGAGAGTGTAAGTGGGTGCCCTGGAGTGGCCGCCACCCAACCCCGCCTCAAGCCC
AGCCCGCCCGCACTCACCACGCACGACCGCGAGCCATCGCGCTCTAGGACGCAGTCTGCATGCTCGTGGCACTCGCTGGGCGAGCCGTCG
GGGCAGAAGCGCTGTGCGCGCCG C/T TGGCAGCCGGACGCCTGGTCGCCCACGAAGCCGGGCTGGCACGGGCCGCACTGGAAGGAGCC
CTGCGCCGGAGCCGCCGGAGGTCAGCGCAGGCCGCCCGCCGCTCGCCCCACCTCCCGCGATCCTTTCTTCCTCCCCAGCGGGCCTTACCC
GGGTGTTGATGCACACGGAGTTGGGGACGCAGTTATGTTGCCCGGTCT-3'

[Top]

RS ID: 35029628 Link_out

Alleles: -/C

Validation:

Not Completed

Details:

Chromosome Reference Position
19 18895134

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
frameshift NM_000095 Link_out NP_000086 Link_out 3 R [Arg] / R [Arg]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTGAGCCACCACGCCTGGACCAGCATAGGCTCATTCTAACTGCCCTGTATCTTTCCTATCGTACAGATGAGGGGACCAGGGTCACAC
AGCCCCTGCCTGGCCAGGGCACTCCCACCTGGGCCTGTGTGTCCCCAGCCCAGCCCACCACAGAGGGTGGAGTCCCCACCTGATGTAGCC
CACTTGGGGCCGGTGCTGCAGGAACCAACGATAGGACTTCTTGTCCTTCCAACCCACGTTTCGCGGGTCCTTCCACAGCAGCCGCACCTG
GGACTCTGTGTCTCCTGTATGCCACAGAGCGTT -/C CCGCAGCTGTTCCCCGGGGCCTGTGGAAGACTTCACAGCCTGCCAATACCCA
GGAAAGGTGGTCAGAGACCTCGTGGGCCACCGGAGCCCCCCTAGACACCTTCCTGGAGAGACAGTTGGGAGCAGCAGGTGGTGGGCGGCC
AGGGGGATCCGGATGAGAGACCCACAAGGAAGCCTTCTTCAGGGGCCAAATGGCAGCTTGGGGATAGGTCACAGGGGGCAGCAGTGGTCT
GCAGGTTCATGAGAGGATTTGGGAGTCCGTGGACAGATTCAGGGTCTGGGAGGATGGGGGGCTCTGCA-3'

[Top]

RS ID: 34467947 Link_out

Alleles: C/T

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
19 18895865

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000095 Link_out NP_000086 Link_out 3 T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCAGAGGAGGGCTGGGACAGCTTTGAGGTCCATAGTATGAGGCTAGGGGGCTGGGGGGCTCTAAGGGCTGTAAAGGGTTTTACGGA
GGGTCATGGGAGGGCATGAGGACCGCAGAGGTCAGGCACGGACGGCCCTGGCACCTTGAGTTGGATGCCAGGCTCGGCCACAGCACGGAA
GGGGTTCGCCTGCCAATACGTTTGCTCCATCTGCTTCCACATGACCACGTAGAAGCTGGAGCTGTCCTGGTAGCCAAAGATGAAGCCCGC
ATAGTCGTCATCCGTGACCGTGTTCACATGGAA C/T GTGCCCTCGAAGTCCACGCCATTGAAGGCAGTGTAACCTAGGGATGGAAAGA
GAGCAGTGGCCTTTCCGAACGCCAGCCCCAGCCCCCGGAACCTGGCACCCAGAACCCAAACCTGCCCCCTGGGTCCCGATCTGCCTGCAG
ACCTGCACCATTCCCACTCGCAGAGCCCGGACTCAGCCACGCCCCCCATCTACCATTGGCCACGCCCCTCCAGAGTCCACCTCCACTTGG
CCCCGCCCTTCCCGAGCCCGCCCCTCCTCTGGCCCCGCGCCTTCTCCTCCCGGGCCCGCCCATATAAC-3'

[Top]

RS ID: 28936669 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
19 18896846

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 2 D [Asp] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTACCCAACTCAGACCAGAAGGACAGTGATGGCGATGGTATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAGCAACCCGGATCAG
GCGGATGTGGACCACGACTTTGTGGGAGATGCTTGTGACAGCGATCAAGACCAGGATGGAGACGGACATCAGGACTCTCGGGACAACTGT
CCCACGGTGCCTAACAGTGCCCAGGAGGACTCAGACCACGATGGCCAGGGTGATGCCTGCGACGACGACGACG A/G CAATGACGGAGT
CCCTGACAGTCGGGACAACTGCCGCCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAGGGACGGCGTGGGCGACGTGTGCCAGGACGA
CTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAAGTCACGCTCACCGACTTCAGGGCCTTCCAGACAGT
CGTGCTGGACCCGGAGGGTGACGCGCAGATTGACCCCAACTGGGTGGTGCTCAACCAG-3'

[Top]

RS ID: 28936668 Link_out

Alleles: A/G

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 18896906

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 2 N [Asn] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GCGTGCGACGACGACATCGACGGCGACCGGATCCGCAACCAGGCCGACAACTGCCCTAGGGTACCCAACTCAGACCAGAAGGACAGT
GATGGCGATGGTATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAGCAACCCGGATCAGGCGGATGTGGACCACGACTTTGTGGGAGAT
GCTTGTGACAGCGATCAAGACCAGGATGGAGACGGACATCAGGACTCTCGGGACAACTGTCCCACGGTGCCTA A/G CAGTGCCCAGGA
GGACTCAGACCACGATGGCCAGGGTGATGCCTGCGACGACGACGACGACAATGACGGAGTCCCTGACAGTCGGGACAACTGCCGCCTGGT
GCCTAACCCCGGCCAGGAGGACGCGGACAGGGACGGCGTGGGCGACGTGTGCCAGGACGACTTTGATGCAGACAAGGTGGTAGACAAGAT
CGACGTGTGTCCGGAGAACGCTGAAGTCACGCTCACCGACTTCAGGGCCTTCCAGACA-3'

[Top]

RS ID: 28936368 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 18893939

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 1 R [Arg] / W [Trp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CATCCAACTCAAGGCTGTGAAGTCTTCCACAGGCCCCGGGGAACAGCTGCGGAACGCTCTGTGGCATACAGGAGACACAGAGTCCCA
GGTGCGGCTGCTGTGGAAGGACCCGCGAAACGTGGGTTGGAAGGACAAGAAGTCCTATCGTTGGTTCCTGCAGCACCGGCCCCAAGTGGG
CTACATCAGGGTGCGATTCTATGAGGGCCCTGAGCTGGTGGCCGACAGCAACGTGGTCTTGGACACAACCATG C/T GGGGTGGCCGCC
TGGGGGTCTTCTGCTTCTCCCAGGAGAACATCATCTGGGCCAACCTGCGTTACCGCTGCAATGACACCATCCCAGAGGACTATGAGACCC
ATCAGCTGCGGCAAGCCTAGGGACCAGGGTGAGGACCCGCCGGATGACAGCCACCCTCACCGCGGCTGGATGGGGGCTCTGCACCCAGCC
CCAAGGGGTGGCCGTCCTGAGGGGGAAGTGAGAAGGGCTCAGAGAGGACAAAATAAAG-3'

[Top]

RS ID: 28933699 Link_out

Alleles: G/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 18896853

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 1 D [Asp] / Y [Tyr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCTAGGGTACCCAACTCAGACCAGAAGGACAGTGATGGCGATGGTATAGGGGATGCCTGTGACAACTGTCCCCAGAAGAGCAACCC
GGATCAGGCGGATGTGGACCACGACTTTGTGGGAGATGCTTGTGACAGCGATCAAGACCAGGATGGAGACGGACATCAGGACTCTCGGGA
CAACTGTCCCACGGTGCCTAACAGTGCCCAGGAGGACTCAGACCACGATGGCCAGGGTGATGCCTGCGACGAC G/T ACGACGACAATG
ACGGAGTCCCTGACAGTCGGGACAACTGCCGCCTGGTGCCTAACCCCGGCCAGGAGGACGCGGACAGGGACGGCGTGGGCGACGTGTGCC
AGGACGACTTTGATGCAGACAAGGTGGTAGACAAGATCGACGTGTGTCCGGAGAACGCTGAAGTCACGCTCACCGACTTCAGGGCCTTCC
AGACAGTCGTGCTGGACCCGGAGGGTGACGCGCAGATTGACCCCAACTGGGTGGTGCT-3'

[Top]

RS ID: 10421797 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
19 18895132

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_000095 Link_out NP_000086 Link_out 3 N [Asn] / N [Asn]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGGCCAGGGCACTCCCACCTGGGCCTGTGTGTCCCCAGCCCAGCCCACCACAGAGGGTGGAGTCCCCACCTGATGTAGCCCACTTGG
GGCCGGTGCTGCAGGAACCAACGATAGGACTTCTTGTCCTTCCAACCCACGTTTCGCGGGTCCTTCCACAGCAGCCGCACCTGGGACTCT
GTGTCTCCTGTATGCCACAGAGC A/G TTCCGCAGCTGTTCCCCGGGGCCTGTGGAAGACTTCACAGCCTGCCAATACCCAGGAAAGGT
GGTCAGAGACCTCGTGGGCCACCGGAGCCCCCCTAGACACCTTCCTGGAGAGACAGTTGGGAGCAGCAGGTGGTGGGCGGCCAGGGGGAT
CCGGATGAGAGACCCACAAGGAAGCCTTCTTCAGGGGCCAAATGGCAG-3'

[Top]

RS ID: 3179763 Link_out

Alleles: C/T

Validation:

  • By hap map

Details:

Chromosome Reference Position
19 18897455

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_000095 Link_out NP_000086 Link_out 1 R [Arg] / C [Cys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGCCTGGTCCCAATCTTGGGGCTCTGGTCCCGTGGATTTCTGCAGGGATC C/T GCAACCAGGCCGACAACTGCCCTAGGGTACCC
AACTCAGACCAGAAGGAC-3'