SNPJam Report for CHRNA10

Showing coding SNPs for CHRNA10 (Gene ID: 57053)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 2231548 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
11 3687429

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_020402 Link_out NP_065135 Link_out 1 R [Arg] / C [Cys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTGCTTCCATCCATGGGGCTTGGAGGGTCTGGAGAGCTTCATGGTGGGCTTATTTCCATTTGTGCAGAGGTGGCTGGGAAGCTCAGG
AACCACAGGCTTTTGTTTTGAGTCAATTGGCTTTCTCTCTCTCTTGCAGGGAAGTACTACATGGCCACTATGACCATGGTCACATTCTCA
ACAGCACTCACCATCCTTATCATGAACCTGCATTACTGTGGTCCCAGTGTCCGCCCAGTGCCAGCCTGGGCTAGGGCCCTCCTGCTGGGA
CACCTGGCACGGGGCCTGTGCGTGCGGGAAAGAGGGGAGCCCTGTGGGCAGTCCAGGCCACCTGAGTTATCTCCTAGCCCCCAGTCGCCT
GAAGGAGGGGCTGGCCCCCCAGCGGGCCCTTGCCACGAGCCACGATGTCTGTGCCGCCAGGAAGCCCTACTGCACCACGTAGCCACCATT
GCCAATACCTTCCGCAGCCACCGAGCTGCCCAGCGCTGCCATGAGGACTGGAAG C/T GCCTGGCCCGTGTGATGGACCGCTTCTTCCT
GGCCATCTTCTTCTCCATGGCCCTGGTCATGAGCCTCCTGGTGCTGGTGCAGGCCCTGTGAGGGCTGGGACTAAGTCACAGGGATCTGCT
GCAGCCACAGCTCCTCCAGAAAGGGACAGCCACGGCCAAGTGGTTGCTGGTCTTTGGGCCAGCCAGTCTCTCCCCACTGCTCCTAAGATC
CTGAGACACTTGACTTCACAATCCACAAGGGAGCACTCATTGTCTACACACCCTAACTAAAGGAAGTCCAGAGCCTGCCACTCCCCTAAT
TCCAAAAAAAAGAGGAACTCTACAAAGGCCAAGATCACAGAGTACAGTCTTGGAGGGACAGAATTGTTTGTGCTGGGTATTGGAGCTCTC
AGTGGGGAGCACATGGGTTATAATGAGAAACTGAACTGTACTGCTGCATTTCCTGTCTTCCTTCCTAGGTGGCTGCTTTGCAGGGCTTTG
GCTGTTACCTTTCCCTGCT-3'

[Top]

RS ID: 2231547 Link_out

Alleles: A/C

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
11 3687626

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_020402 Link_out NP_065135 Link_out 2 E [Glu] / A [Ala]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCTCTGGGTATCCCATTTGTACAAAAAGGATTCGTATCTTGCCCCAGCTCATGCCCGTCGTTATTTGAGAGCGGGACTGTCCTGGAT
TGTGTATGAGTGCAGCCTCCAGCAGTGACGGGAGCAATTAGAGAGCAGTAGCTTCCGATGACCCACGTGTAGGAATGAAGGATGGGGAGA
ACTCGGCCCTTACCTCCTTCCTGCTTCCATCCATGGGGCTTGGAGGGTCTGGAGAGCTTCATGGTGGGCTTATTTCCATTTGTGCAGAGG
TGGCTGGGAAGCTCAGGAACCACAGGCTTTTGTTTTGAGTCAATTGGCTTTCTCTCTCTCTTGCAGGGAAGTACTACATGGCCACTATGA
CCATGGTCACATTCTCAACAGCACTCACCATCCTTATCATGAACCTGCATTACTGTGGTCCCAGTGTCCGCCCAGTGCCAGCCTGGGCTA
GGGCCCTCCTGCTGGGACACCTGGCACGGGGCCTGTGCGTGCGGGAAAGAGGGG A/C GCCCTGTGGGCAGTCCAGGCCACCTGAGTTA
TCTCCTAGCCCCCAGTCGCCTGAAGGAGGGGCTGGCCCCCCAGCGGGCCCTTGCCACGAGCCACGATGTCTGTGCCGCCAGGAAGCCCTA
CTGCACCACGTAGCCACCATTGCCAATACCTTCCGCAGCCACCGAGCTGCCCAGCGCTGCCATGAGGACTGGAAGCGCCTGGCCCGTGTG
ATGGACCGCTTCTTCCTGGCCATCTTCTTCTCCATGGCCCTGGTCATGAGCCTCCTGGTGCTGGTGCAGGCCCTGTGAGGGCTGGGACTA
AGTCACAGGGATCTGCTGCAGCCACAGCTCCTCCAGAAAGGGACAGCCACGGCCAAGTGGTTGCTGGTCTTTGGGCCAGCCAGTCTCTCC
CCACTGCTCCTAAGATCCTGAGACACTTGACTTCACAATCCACAAGGGAGCACTCATTGTCTACACACCCTAACTAAAGGAAGTCCAGAG
CCTGCCACTCCCCTAATTC-3'

[Top]

RS ID: 2231546 Link_out

Alleles: A/G

Validation:

  • By frequency
  • By cluster

Details:

Chromosome Reference Position
11 3687651

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_020402 Link_out NP_065135 Link_out 1 G [Gly] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ATCACCACAAACCTAGGAAGTAGGTCCTCTGGGTATCCCATTTGTACAAAAAGGATTCGTATCTTGCCCCAGCTCATGCCCGTCGTT
ATTTGAGAGCGGGACTGTCCTGGATTGTGTATGAGTGCAGCCTCCAGCAGTGACGGGAGCAATTAGAGAGCAGTAGCTTCCGATGACCCA
CGTGTAGGAATGAAGGATGGGGAGAACTCGGCCCTTACCTCCTTCCTGCTTCCATCCATGGGGCTTGGAGGGTCTGGAGAGCTTCATGGT
GGGCTTATTTCCATTTGTGCAGAGGTGGCTGGGAAGCTCAGGAACCACAGGCTTTTGTTTTGAGTCAATTGGCTTTCTCTCTCTCTTGCA
GGGAAGTACTACATGGCCACTATGACCATGGTCACATTCTCAACAGCACTCACCATCCTTATCATGAACCTGCATTACTGTGGTCCCAGT
GTCCGCCCAGTGCCAGCCTGGGCTAGGGCCCTCCTGCTGGGACACCTGGCACGG A/G GCCTGTGCGTGCGGGAAAGAGGGGAGCCCTG
TGGGCAGTCCAGGCCACCTGAGTTATCTCCTAGCCCCCAGTCGCCTGAAGGAGGGGCTGGCCCCCCAGCGGGCCCTTGCCACGAGCCACG
ATGTCTGTGCCGCCAGGAAGCCCTACTGCACCACGTAGCCACCATTGCCAATACCTTCCGCAGCCACCGAGCTGCCCAGCGCTGCCATGA
GGACTGGAAGCGCCTGGCCCGTGTGATGGACCGCTTCTTCCTGGCCATCTTCTTCTCCATGGCCCTGGTCATGAGCCTCCTGGTGCTGGT
GCAGGCCCTGTGAGGGCTGGGACTAAGTCACAGGGATCTGCTGCAGCCACAGCTCCTCCAGAAAGGGACAGCCACGGCCAAGTGGTTGCT
GGTCTTTGGGCCAGCCAGTCTCTCCCCACTGCTCCTAAGATCCTGAGACACTTGACTTCACAATCCACAAGGGAGCACTCATTGTCTACA
CACCCTAACTAAAGGAAGT-3'

[Top]

RS ID: 2231543 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 3688593

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_020402 Link_out NP_065135 Link_out 2 P [Pro] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CCCTACCCCGACGTCACCTTCACGCTGCTGTTGCGCCGCCGCGCCGCCGCCTACGTGTGCAACCTGCTGCTGCCCTGCGTGCTCATC
TCGCTGCTTGCGC C/T GCTCGCCTTCCACCTGCCTGCCGACTCAGGCGAGAAGGTGTCGCTGGGCGTCACCGTGCTGCTGGCGCTCAC
CGTCTTCCAGTTGCTGCTGGCCGAGAGC-3'

[Top]

RS ID: 2231542 Link_out

Alleles: G/T

Validation:

Not Completed

Details:

Chromosome Reference Position
11 3688615

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_020402 Link_out NP_065135 Link_out 1 V [Val] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CACCTACGGCTGCTGCTCCGAGCCCTACCCCGACGTCACCTTCACGCTGCTGTTGCGCCGCCGCGCCGCCGCCTACGTGTGCAACCT
GCTGCTGCCCTGC G/T TGCTCATCTCGCTGCTTGCGCCGCTCGCCTTCCACCTGCCTGCCGACTCAGGCGAGAAGGTGTCGCTGGGCG
TCACCGTGCTGCTGGCGCTCACCGTCTT-3'

[Top]

RS ID: 2231541 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
11 3688799

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_020402 Link_out NP_065135 Link_out 3 P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CGTGCCGCGTGGATGTAGCAGCCTTCCCGTTCGACGCCCAGCACTGCGGCCTGACGTTCGGCTCCTGGACTCACGGCGGGCACCAAC
TGGATGTGCGGCC A/G CGCGGCGCTGCAGCCAGCCTGGCGGACTTCGTGGAGAACGTGGAGTGGCGCGTGCTGGGCATGCCGGCGCGG
CGGCGCGTGCTCACCTACGGCTGCTGCT-3'

[Top]

RS ID: 2231538 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
11 3691098

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_020402 Link_out NP_065135 Link_out 3 L [Leu] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGACAACCCTCCTTACTGACCCTCCAGAGTGCCTGGGAGCTGAGGGCCGGCTGGCTCTCAAGCTGTTCCGTGACCTCTTTGCCAACT
ACACAAGTGCCCT A/G AGACCTGTGGCAGACACAGACCAGACTCTGAATGTGACCCTGGAGGTGACACTGTCCCAGATCATCGACATG
GTGCGTTGTGGTGGTGGTACAGCTGTGG-3'