SNPJam Report for CANX

Showing coding SNPs for CANX (Gene ID: 821)

Show all SNPs for this gene at dbSNP

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This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

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RS ID: 112228035 Link_out

Alleles: C/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 179149990

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_001024649 Link_out NP_001019820 Link_out 3 G [Gly] / G [Gly]
coding-synonymous NM_001746 Link_out NP_001737 Link_out 3 G [Gly] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CATTTTTTTTTCTAGGGAATCTGGAAACCCAGGAAAATACCAAATCCAGATTTCTTTGAAGATCTGGAACCTTTCAGAATGACTCCT
TTTAGTGCTATTGGTTTGGAGCTGTGGTCCATGACCTCTGACATTTTTTTTGACAACTTTATCATTTGTGCTGATCGAAGAATAGTTGAT
GATTGGGCCAATGATGGATGGGG C/T CTGAAGAAAGCTGCTGATGGGGCTGCTGAGGTTCGTGTTTGCTGCTTGTGCATTTGTGTCTG
TTATTGTAAGGAGCTGTTATTTTGTGAAAGTCTGTGTTAAGGTTTTTTTTCTTCATTTGGCAATATTGGCATAAAAAGTATAACCATATG
CCTGCAAAAGACACAATATTGGGTTTTGGGGCATGATTTCATTAGTCT-3'

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RS ID: 112133623 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
5 179136996

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_001024649 Link_out NP_001019820 Link_out 3 K [Lys] / K [Lys]
coding-synonymous NM_001746 Link_out NP_001737 Link_out 3 K [Lys] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TTATCATACACTTTTGAAACGTTGCTTTTGAACACTTTGAGTACAGTGACTTCAAATAATCCTTTTTTGTTTTTGAAGGATCAGTTC
CATGACAAGACCCCTTATACGATTATGTTTGGTCCAGATAAATGTGGAGAGGACTATAAACTGCACTTCATCTTCCGACACAAAAACCCC
AAAACGGGTATCTATGAAGAAAA A/G CATGCTAAGAGGCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAACACATCTTTA
CACACTAAGTAAGAAAAAGCATTAGTTTGGGGGCTTATGGTATTACATATATATCATCCATTTAATTTAAAGATTGTATATCTGGCCGGG
CACTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGG-3'

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RS ID: 111809764 Link_out

Alleles: A/T

Validation:

Not Completed

Details:

Chromosome Reference Position
5 179153686

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
stop-gain NM_001024649 Link_out NP_001019820 Link_out 1 K [Lys] / X
stop-gain NM_001746 Link_out NP_001737 Link_out 1 K [Lys] / X

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGAATGGCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTG
TCTCCAAAAAAAAAAAAAAAAATTGTAGATCTAGAGATGTGTTCTAATGCTAATATATAATCACCAAAAATAATAAGGTTTTGCTCAGTT
GTTTAACTTCTGTCTTAGAAGAG A/T AACAGAAAAGTGATGCTGAAGAAGATGGTGGCACTGTCAGTCAAGAGGAGGAAGACAGAAAA
CCTAAAGCAGAGGTAAAGGAAAGGGGTCACACATTTTGTTTTACCAAGCTGAAGGTACATTTATGTAAAGGGAATATTTTAATAGGGTAG
TTTACAGTGGCTTATGGCAGTAAAAATTCTGTTAAAGCCAATTTTGTT-3'

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RS ID: 79378421 Link_out

Alleles: A/C

Validation:

Not Completed

Details:

Chromosome Reference Position
5 179135353

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_001024649 Link_out NP_001019820 Link_out 1 L [Leu] / M [Met]
missense NM_001746 Link_out NP_001737 Link_out 1 L [Leu] / M [Met]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TATGCAACTAGGAGGTGTTTTTTTTGGCATTTAAAGGACCTTCAGAGGTAGAGTTAAGCAGTGGAACTTTTTTGTGTTGTCTTGTAG
GAAAGTGGGAGGTAGAGGAAATGAAGGAGTCAAAGCTTCCAGGTGATAAAGGACTTGTGTTGATGTCTCGGGCCAAGCATCATGCCATCT
CTGCTAAACTGAACAAGCCCTTC A/C TGTTTGACACCAAGCCTCTCATTGTTCAGTAAGTGAAATGCTTGTTGGATAAAAGCTTTCTG
CAAAGGGTAATCTTAGAAGACATTATGTAACTTTTACTCTATGTTAAAAAATTATGAGATTATATAAGTGGTGGTAGGGATTTTTGGGTG
AATTTAAACACCTTGTAATTAATAGTTTTTCCTGGCTAATGCATTATT-3'

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RS ID: 75423033 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
5 179151758

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_001024649 Link_out NP_001019820 Link_out 2 E [Glu] / V [Val]
missense NM_001746 Link_out NP_001737 Link_out 2 E [Glu] / V [Val]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTATACAGCCTGGAACAGAACTTTGCCTGTAGGCATTCAGGAATTATATAACATAATACATGAACATGTAAACAAAATTGTACTTTG
GGGAACATTTCAGAAACAGACCAGTGGTATGGAGTATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAGAAGAGAAGGA
AGAGGAAAAGGACAAGGGAGATG A/G GGAGGAGGAAGGAGAAGAGAAACTTGGTAAGAAACAGAGTCCAGAAAATCTGCTTTAAGCCA
AGACCCTACGATGTTGTTAAACCTTTACAGTCAAGTTAAGGATTGTTTTTAGCCAGGCGTGGTGGCTCAAGCCTGTAATCCTAGCACTTT
GGGAGGTTGAAGCAGGAAAATCACTTGAGCCCAGGAGTTTAAGGCTGT-3'