SNPJam Report for CALR

Showing coding SNPs for CALR (Gene ID: 811)

Show all SNPs for this gene at dbSNP

This SNP viewer is in beta and your feedback is appreciated!

This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 79497711 Link_out

Alleles: C/T

Validation:

  • By frequency

Details:

Chromosome Reference Position
19 13051170

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004343 Link_out NP_004334 Link_out 3 F [Phe] / F [Phe]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGGGGTGGTGGCAAATGGCTGTCATGGGGAGATTCAGAGGTCAGCCTCATTGGGGGGTGGCCCCCGCTCACCTTCTTCCTTCTTCAG
GATGATGAGTTTACACACCTGTACACACTGATTGTGCGGCCAGACAACACCTATGAGGTGAAGATTGACAACAGCCAGGTGGAGTCCGGC
TCCTTGGAAGACGATTGGGACTT C/T CTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGGGC
CAAGATCGATGATCCCACAGACTCCAAGCCTGAGGTTGGTGTTTGGGCAGGGGCTCTGCTCTCCACATTGGAGGGTGTGGAAGACATCTG
GGCCAACTCTGATCTCTTCATCTACCCCCCAGGACTGGGACAAGCCCG-3'

[Top]

RS ID: 76337616 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 13050033

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004343 Link_out NP_004334 Link_out 3 D [Asp] / D [Asp]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGAGTGTCGGGGATCTCCTTTCCTGTCCCCAGCAGCTTGTGGCTCTCGGCAGATGTTTGGTGTGGGGGGGGATTAGCACAGCCGCTC
TGACCTACCCCTCTAATCCCCCACTTAGACGGGTGGACTTCCCGCTGGATCGAATCCAAACACAAGTCAGATTTTGGCAAATTCGTTCTC
AGTTCCGGCAAGTTCTACGGTGA C/T GAGGAGAAAGATAAAGGTAAGAGCCTAGGAGTGGGTGCTCAGATCCGGGAGGACTTCCTGGC
AGAAGTCCTTGTCTGTACACACACAGCCGGGACAGTCCCCTTGGAGGAGGACAGGTGGAGGAAGTGGGGGAGTCTTCTCTATTCTCTAAG
TCGAGGGTCCTCGCGAGTCAAGGCCCAACGGTGACCTCACTACCGTCC-3'

[Top]

RS ID: 11547569 Link_out

Alleles: C/T

Validation:

  • By cluster

Details:

Chromosome Reference Position
19 13051090

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004343 Link_out NP_004334 Link_out 1 V [Val] / M [Met]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTCCACCTGGCTGTTGTCAATCTTCACCTCATAGGTGTTGTCTGGCCGCA C/T AATCAGTGTGTACAGGTGTGTAAACTCATCAT
CCTTGCAACGGATGTCCT-3'

[Top]

RS ID: 11547568 Link_out

Alleles: C/G

Validation:

  • By hap map

Details:

Chromosome Reference Position
19 13050291

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004343 Link_out NP_004334 Link_out 3 F [Phe] / L [Leu]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GGTTTGCAGACAAGCCAGGATGCACGCTTTTATGCTCTGTCGGCCAGTTT C/G GAGCCTTTCAGCAACAAAGGCCAGACGCTGGT
GGTGCAGTTCACGGTGAA-3'

[Top]

RS ID: 11547565 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome Reference Position
19 13054694

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
coding-synonymous NM_004343 Link_out NP_004334 Link_out 3 E [Glu] / E [Glu]
near-gene-5 NM_005053 Link_out Not Applicable Not Applicable Not Applicable

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AAAGATGAGGATGAGGAGGATGAGGAGGACAAGGAGGAAGATGAGGAGGA A/G GATGTCCCCGGCCAGGCCAAGGACGAGCTGTA
GAGAGGCCTGCCTCCAGG-3'

[Top]

RS ID: 11547563 Link_out

Alleles: G/T

Validation:

  • By hap map

Details:

Chromosome Reference Position
19 13051433

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004343 Link_out NP_004334 Link_out 1 W [Trp] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-ACCCTGATGCTAAGAAGCCCGAGGACTGGGATGAAGAGATGGACGGAGAG G/T GGGAACCCCCAGTGATTCAGAACCCTGAGTAC
AAGGGTGAGTGGAAGCCC-3'

[Top]

RS ID: 11547562 Link_out

Alleles: C/G

Validation:

Not Completed

Details:

Chromosome Reference Position
19 13051599

Function Class mRNA Accession Protein Accession Reading Frame Amino Acids
missense NM_004343 Link_out NP_004334 Link_out 3 K [Lys] / N [Asn]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GAGTACAAGGGTGAGTGGAAGCCCCGGCAGATCGACAACCCAGATTACAA C/G GGCACTTGGATCCACCCAGAAATTGACAACCC
CGAGTATTCTCCCGATCC-3'