SNPJam: show

Showing coding SNPs for ACCN2 (Gene ID: 41)

Show all SNPs for this gene at dbSNP

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This SNPJam view is a snapshot of the information available at dbSNP and HapMap. It has been reformated to include the information most relevant to drug and metabolomics research.

Please note that population frequency data is updated on a nightly basis and may not be present if this gene was recently annotated.

Show all non-coding SNPs

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RS ID: 74090033 Link_out

Alleles: A/G

Validation:

By cluster

Details:

Chromosome	Reference Position
12	50452627

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
coding-synonymous	NM_001095	NP_001086	3	T [Thr] / T [Thr]
coding-synonymous	NM_020039	NP_064423	3	T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CTTGGTCAGCCACCTCTGGGCTTGCAAAGCAGGGAAGTCTTCTGCCCGAGGAGTGGTGACCTCTGGAGATGAGGATTCTGGATGGGC
ACATGTGGAGGGGCTCCATGTGTACTTTCATCCCAGGACAATGATAGACTGTCCCTCCCTCCTCCCCCAGGATCCCCTCAACAAGGATGG
AACTGAAGGCCGAGGAGGAGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCAC A/G CTGCACGGCCTG
GCCCACATCTTCTCCTACGAGCGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGCTTCCTGGGCTCCCTGGCTGTGCTGCTGTGTGTG
TGCACGGAGCGTGTGCAGTACTACTTCCACTACCACCATGTCACCAAGCTCGACGAGGTGGCTGCCTCTCAGCTTACCTTCCCTGCTGTC
ACGCTGTGCAACCTCAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGACCTGTATC-3'

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RS ID: 61735039 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome	Reference Position
12	50452735

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
coding-synonymous	NM_001095	NP_001086	3	T [Thr] / T [Thr]
coding-synonymous	NM_020039	NP_064423	3	T [Thr] / T [Thr]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-TGGGCCCTGTGCTTCCTGGGCTCCCTGGCTGTGCTGCTGTGTGTGTGCAC A/G GAGCGTGTGCAGTACTACTTCCACTACCACCA
TGTCACCAAGCTCGACGA-3'

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RS ID: 61731226 Link_out

Alleles: C/T

Validation:

By frequency
By cluster

Details:

Chromosome	Reference Position
12	50471109

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
coding-synonymous	NM_001095	NP_001086	3	I [Ile] / I [Ile]
coding-synonymous	NM_020039	NP_064423	3	I [Ile] / I [Ile]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AAATGGAGAATGGGCTGCACGGGAGGAACCATTCCCAAAGGGTGTTGAGATTCCAACAGCTGGGGTGGCTAGGAACAGCCCTTGGTG
AGTAGAGGGTGCTGGCAGGACTCTTAGGCTCTCCACTCTGCCCTCGCCAGGTCTTCACACGCTATGGAAAGTGCTACACGTTCAACTCGG
GCCGAGATGGGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGGGCAATGGGCTGGAAATCATGCTGGACAT C/T CAGCAGGACGAG
TACCTGCCTGTGTGGGGGGAGACTGGTACGTCACCCACTTCAGGGGCCCCTCTGCATGGCTCTAGGCCCCAGCCTCTGCCAGGGGATTCC
TGGGCTTCACTGTGAGACCTGGGCAGGGCCCGGGCTTTCCCCTCTCCCTCCAGCATCTCACCATCTCTATCACTGACTCTACCTGACTTC
CACACTCACATCTCTCTGGCTCCCACTTCCTGGTTCAGTTACTCTCCAAGGTAACCAG-3'

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RS ID: 61731225 Link_out

Alleles: A/G

Validation:

Not Completed

Details:

Chromosome	Reference Position
12	50452619

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
missense	NM_001095	NP_001086	1	S [Ser] / G [Gly]
missense	NM_020039	NP_064423	1	S [Ser] / G [Gly]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGGAGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGC A/G GCTCCACACTGCACGGCCTGGCCCACATCTTC
TCCTACGAGCGGCTGTCT-3'

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RS ID: 34324865 Link_out

Alleles: -/C

Validation:

Not Completed

Details:

Chromosome	Reference Position
12	50453626

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
frameshift	NM_001095	NP_001086	3	P [Pro] / P [Pro]
frameshift	NM_020039	NP_064423	3	P [Pro] / P [Pro]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-CATGTGCTGGGATGGGATGCCCTGCCCCTGGGCAGCCACTACAGTTCCTCCTGTCATTTCAGACCCATGTGGTAGAGCCTCTGCATG
CCCAGCTCTCCTTCCTTGCCTACACCTGGGACTGATCCCCAGGGCTGGAGGCTGCCCCCATCACCCAAGTTGGGTGCAGGACACTGATGA
CTGTACTGACCCGTGTGTCACTCACCCCCGGACCCCAGGTATGAGATACCAGACACACAGATGGCAGATGAAAAGCAGCTGGAGATACTG
CAGGACAAAGCCAACTTCCGCAGCTTCAAACCC -/C AAACCCTTCAACATGCGTGAGTTCTACGACCGAGCTGGGCACGACATTCGAG
ACATGCTGCTCTCCTGCCACTTCCGGGGGGAGGTCTGCAGCGCTGAAGACTTCAAGGTGGTGAGTCCCCTCGTGTGGGGTGTGAGTCAGC
CTGGCCCACAGAGGAGGAGGAGGAGACAAGGAGCAGGCTGGGCCTCTCCGGGTGCTTGCTACTCTGGGAGAGGAAGTTGTATGTCCTGGG
GTTTGCTTCTAGTAGAAGGGGAGTTTGTTCAGCATAGGGGCACATTTGCACTCACTGCATGAGCACCT-3'

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RS ID: 2307080 Link_out

Alleles: A/G

Validation:

By frequency
By 2 hit 2 allele
By cluster

Details:

Chromosome	Reference Position
12	50473755

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
coding-synonymous	NM_001095	NP_001086	3	K [Lys] / K [Lys]
coding-synonymous	NM_020039	NP_064423	3	K [Lys] / K [Lys]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-AGGGTGAAGGGCAGGTCACGGAAAGAGAAAGGGGCCCAGAGTTTCTCTGGGCAGAGCTAGGATGTGCATGTGGGAAGGTGCTGGCAG
AAGGGCACCACTCAACTGAGACCTCTCACCTGGCTGAGTGCAGACTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTGTGAAATGCCT
TGCAACCTGACCCGCTATGGCAA A/G GAGCTGTCCATGGTCAAGATCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAAGTTCAA
CAAATCTGAGCAATACATAGGGTAAGGGCTCTGGCTGGGTAGAGCAAGGCCCTTGGGTTGGGACTGTGGAATGGATGAGTGGGGTTTGAT
GGGGGCGGGGGCTGGCAGGCAGGGGGAACTTGAGATAACACGGGGAAG-3'

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RS ID: 653576 Link_out

Alleles: C/G

Validation:

By frequency
By hap map
By cluster

Details:

Chromosome	Reference Position
12	50452708

Function Class	mRNA Accession	Protein Accession	Reading Frame	Amino Acids
coding-synonymous	NM_001095	NP_001086	3	S [Ser] / S [Ser]
coding-synonymous	NM_020039	NP_064423	3	S [Ser] / S [Ser]

Source: dbSNP

Population Frequencies:

Not Completed

Sequence:

5'-GTTGGCTGGGCTCTATGGTGGGTCAGGGAGGCAGACATCCTGACTGGAACTCAAGCAACTCCAGGAGCAGGGCTGAGGGAGGGTGGG
AGCCACCCACCTGTTGTTGAGCAGGGCCAGCAGCTCCCCAGCATGATACAGGTCATTCTTGGAGACTTGGCTAAAGCGGAACTCGTTGAG
GTTGCACAGCGTGACAGCAGGGAAGGTAAGCTGAGAGGCAGCCACCTCGTCGAGCTTGGTGACATGGTGGTAGTGGAAGTAGTACTGCAC
ACGCTCCGTGCACACACACAGCAGCACAGCCAG C/G GAGCCCAGGAAGCACAGGGCCCACAGTGCCCGCTTCAGAGACAGCCGCTCGT
AGGAGAAGATGTGGGCCAGGCCGTGCAGTGTGGAGCTGCTGGCGAAGGCCTGGATGCTCACCGGCTGGACGCCACCCACCTCCTCCTCCT
CGGCCTTCAGTTCCATCCTTGTTGAGGGGATCCTGGGGGAGGAGGGAGGGACAGTCTATCATTGTCCTGGGATGAAAGTACACATGGAGC
CCCTCCACATGTGCCCATCCAGAATCCTCATCTCCAGAGGTCACCACTCCTCGGGCAGAAGACTTCCC-3'

SNPJam Report for ACCN2